Canek-package: Canek: Batch Correction of Single Cell Transcriptome Data

In Canek: Batch Correction of Single Cell Transcriptome Data

Canek: Batch Correction of Single Cell Transcriptome Data

Description

Non-linear/linear hybrid method for batch-effect correction that uses Mutual Nearest Neighbors (MNNs) to identify similar cells between datasets. Reference: Loza M. et al. (NAR Genomics and Bioinformatics, 2020) \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1093/nargab/lqac022")}.

Author(s)

Maintainer: Martin Loza [e-mail] (ORCID)

Authors:

• Diego Diez [e-mail] (ORCID)

See Also

Useful links:

• https://martinloza.github.io/Canek/

• Report bugs at https://github.com/MartinLoza/Canek/issues

Canek documentation built on Nov. 6, 2023, 1:06 a.m.