analyze_network-network-method | Analysing the network |
as.micro_array | Coerce a matrix into a micro_array object. |
Cascade-package | The Cascade Package: Selection, Reverse-Engineering and... |
compare-methods | Some basic criteria of comparison between actual and inferred... |
cutoff-network-method | Choose the best cutoff |
dim | Dimension of the data |
evolution-network-method | See the evolution of the network with change of cutoff |
gene_expr_simulation-network-method | Simulates microarray data based on a given network. |
geneNeighborhood-network-method | Find the neighborhood of a set of nodes. |
geneSelection | Methods for selecting genes |
head-micro_array-method | Overview of a micro_array object |
inference-micro_array-method | Reverse-engineer the network |
M | Simulated M data for examples. |
micro_array-class | Class '"micro_array"' |
micropredict-class | Class '"micropredict"' |
Net | Simulated network data for examples. |
Net_inf | Reverse-engineered network of the simulated data. |
network | A network object data. |
network-class | Class '"network"' |
network_random | Generates a network. |
plot-methods | Plot |
position-methods | Returns the position of edges in the network |
predict-micro_array-method | Prediction of the gene expressions after a knock-out... |
print-methods | Methods for Function 'print' |
Selection | Selection of genes. |
summary-methods | Methods for Function 'summary' |
unionMicro-methods | Makes the union between two micro_array objects. |
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