ClustVarLV: Clustering of Variables Around Latent Variables

Functions for the clustering of variables around Latent Variables. Each cluster of variables, which may be defined as a local or directional cluster, is associated with a latent variable. External variables measured on the same observations or/and additional information on the variables can be taken into account. A "noise" cluster or sparse latent variables can also de defined.

Author
Evelyne Vigneau [aut, cre], Mingkun Chen [ctb]
Date of publication
2016-08-20 22:26:57
Maintainer
Evelyne Vigneau <evelyne.vigneau@oniris-nantes.fr>
License
GPL-2
Version
1.5.0

View on CRAN

Man pages

apples_sh
apples from southern hemisphere data set
AUPA_psycho
Psychological eating behavior data set
authen_NMR
Authentication data set/ NMR spectra
CLV
Hierarchical clustering of variables with consolidation
CLV_kmeans
K-means algorithm for the clustering of variables
data_biplot
biplot for the dataset
get_comp
To get the latent variables associated with each cluster
get_load
To get the loadings of the external variables regarding the...
get_partition
To get the clusters of variables.
get_sparseload
To get the sparse loadings in each cluster when using the...
imput_clv
Imputation of a data matrix based on CLV results
LCLV
L-CLV for L-shaped data
plot.clv
Graphical representation of the CLV clustering stages
plot.lclv
Graphical representation of the LCLV clustering stages
plot_var
Representation of the variables and their group membership
print.clv
Print the CLV results
print.lclv
Print the LCLV results
stand_quali
Standardization of the qualitative variables
summary.clv
summary and description of the clusters of variables

Files in this package

ClustVarLV
ClustVarLV/inst
ClustVarLV/inst/doc
ClustVarLV/inst/doc/Getting_started_with_ClustVarLV.html
ClustVarLV/inst/doc/Getting_started_with_ClustVarLV.Rmd
ClustVarLV/inst/doc/Getting_started_with_ClustVarLV.R
ClustVarLV/src
ClustVarLV/src/critcpp.cpp
ClustVarLV/src/mincpp.cpp
ClustVarLV/src/RcppExports.cpp
ClustVarLV/NAMESPACE
ClustVarLV/data
ClustVarLV/data/authen_NMR.rda
ClustVarLV/data/apples_sh.rda
ClustVarLV/data/AUPA_psycho.rda
ClustVarLV/R
ClustVarLV/R/xbarmiss.R
ClustVarLV/R/clvk_none.R
ClustVarLV/R/get_sparseload.R
ClustVarLV/R/get_load.R
ClustVarLV/R/plot.clv.R
ClustVarLV/R/consol_calcul_s.R
ClustVarLV/R/crit_h.R
ClustVarLV/R/summary.clv.R
ClustVarLV/R/consol_affect.R
ClustVarLV/R/consol_calcul.R
ClustVarLV/R/CLV.R
ClustVarLV/R/stand_quali.R
ClustVarLV/R/print.clv.r
ClustVarLV/R/print.lclv.r
ClustVarLV/R/covamiss.R
ClustVarLV/R/data_biplot.R
ClustVarLV/R/tabdisj.R
ClustVarLV/R/order_var.R
ClustVarLV/R/clvk_sparse.R
ClustVarLV/R/imput_clv.R
ClustVarLV/R/get_partition.R
ClustVarLV/R/RcppExports.R
ClustVarLV/R/LCLV.R
ClustVarLV/R/mat_init.R
ClustVarLV/R/cp1miss.R
ClustVarLV/R/crit_init.R
ClustVarLV/R/plot_var.R
ClustVarLV/R/clvk_kp1.R
ClustVarLV/R/consol_affect_k.R
ClustVarLV/R/CLV_kmeans.R
ClustVarLV/R/get_comp.R
ClustVarLV/R/plot.lclv.R
ClustVarLV/vignettes
ClustVarLV/vignettes/Getting_started_with_ClustVarLV.Rmd
ClustVarLV/MD5
ClustVarLV/build
ClustVarLV/build/vignette.rds
ClustVarLV/DESCRIPTION
ClustVarLV/man
ClustVarLV/man/imput_clv.Rd
ClustVarLV/man/authen_NMR.Rd
ClustVarLV/man/print.clv.Rd
ClustVarLV/man/get_sparseload.Rd
ClustVarLV/man/summary.clv.Rd
ClustVarLV/man/AUPA_psycho.Rd
ClustVarLV/man/get_partition.Rd
ClustVarLV/man/get_load.Rd
ClustVarLV/man/CLV_kmeans.Rd
ClustVarLV/man/plot_var.Rd
ClustVarLV/man/LCLV.Rd
ClustVarLV/man/CLV.Rd
ClustVarLV/man/plot.lclv.Rd
ClustVarLV/man/apples_sh.Rd
ClustVarLV/man/stand_quali.Rd
ClustVarLV/man/data_biplot.Rd
ClustVarLV/man/print.lclv.Rd
ClustVarLV/man/plot.clv.Rd
ClustVarLV/man/get_comp.Rd