Files in ConsensusOPLS
Consensus OPLS for Multi-Block Data Fusion
MD5
NEWS.md
NAMESPACE
DESCRIPTION
R/RVConsensusOPLS.R
R/koplsCrossValSet.R
R/ConsensusOPLS.R
R/koplsConfusionMatrix.R
R/koplsScale.R
R/koplsPredict.R
R/koplsCenterK.R
R/koplsDummy.R
R/koplsClassify.R
R/VariableImportanceProjection.R
R/koplsSensSpec.R
R/koplsKernel.R
R/ConsensusOPLS-package.R
R/ConsensusOPLSCV.R
R/koplsModel.R
R/RVmodified.R
R/DQ2.R
inst/doc/ConsensusOPLS.Rmd
inst/doc/ConsensusOPLS.R
inst/doc/ConsensusOPLS.html
inst/extdata/RVConsensusOPLS_ConsensusOPLSCV_Q2YhatVars.txt
inst/extdata/BlocksContributions.csv
inst/extdata/RVConsensusOPLS_ConsensusOPLSCV_Yhat.txt
inst/extdata/rename.txt
inst/extdata/RVConsensusOPLS_ConsensusOPLSCV_cvTrainingIndex.txt
inst/extdata/RVConsensusOPLS_8_optModel_OrthoLVsNum.txt
inst/extdata/ConsensusOPLSCV_22_koplsModel_To.txt
inst/extdata/RVConsensusOPLS_avantoptmodel_koplsModel_7_Tp_n10.txt
inst/extdata/collection_matlab_metabo.txt
inst/extdata/PermQ2.csv
inst/extdata/RVConsensusOPLS_avantoptmodel_koplsModel_7_Tp_n3.txt
inst/extdata/RVConsensusOPLS_10_optModel_To.txt
inst/extdata/RVConsensusOPLS_avantoptmodel_koplsModel_7_Tp_n6.txt
inst/extdata/ConsensusOPLSCV_18_koplsModel_Up.txt
inst/extdata/ConsensusOPLSCV_37_koplsMaxClassify_predClass.txt
inst/extdata/ConsensusOPLSCV_08_koplsScale_YScaleObj_stdV.txt
inst/extdata/ConsensusOPLSCV_01_Ydummy.txt
inst/extdata/RVConsensusOPLS_avantoptmodel_koplsModel_7_Tp_n9.txt
inst/extdata/ConsensusOPLSCV_13_koplsCenterKTeTe_KteTe.txt
inst/extdata/ConsensusOPLSCV_36_koplsMaxClassify_predClass.txt
inst/extdata/demoCode_loadings_VIP_metabo.txt
inst/extdata/RVConsensusOPLS_9_optModel_T.txt
inst/extdata/RVConsensusOPLS_2_RV.txt
inst/extdata/ConsensusOPLSCV_41_koplsSensSpec_tot_sens.txt
inst/extdata/ConsensusOPLSCV_23_koplsModel_sstot_K.txt
inst/extdata/ConsensusOPLSCV_24_koplsModel_R2X.txt
inst/extdata/ConsensusOPLSCV_44_koplsConfusionMatrix_confusionMatrix.txt
inst/extdata/ConsensusOPLSCV_29_koplsPredict_EEprime.txt
inst/extdata/RVConsensusOPLS_4_dqq.txt
inst/extdata/RVConsensusOPLS_avantoptmodel_koplsModel_7_Tp_n7.txt
inst/extdata/ConsensusOPLSCV_02_classVectReDummy.txt
inst/extdata/ConsensusOPLSCV_32_koplsRescale_stdV.txt
inst/extdata/RVConsensusOPLS_avantoptmodel_koplsModel_7_Tp_n5.txt
inst/extdata/ConsensusOPLSCV_10_koplsScaleApply_YScaleObjTest_meanV.txt
inst/extdata/ConsensusOPLSCV_12_koplsScaleApply_YScaleObjTest_X.txt
inst/extdata/ConsensusOPLSCV_38_koplsSensSpec_sens.txt
inst/extdata/RVConsensusOPLS_avantoptmodel_koplsModel_7_Tp_n2.txt
inst/extdata/ConsensusOPLSCV_27_koplsPredict_Tp.txt
inst/extdata/ConsensusOPLSCV_34_YhatDaSave.txt
inst/extdata/ConsensusOPLSCV_43_koplsSensSpec_meanSpec.txt
inst/extdata/ConsensusOPLSCV_39_koplsSensSpec_spec.txt
inst/extdata/collection_matlab_micro.txt
inst/extdata/ConsensusOPLSCV_42_koplsSensSpec_meanSens.txt
inst/extdata/demoCode_loadings_VIP_micro.txt
inst/extdata/RVConsensusOPLS_ConsensusOPLSCV_Tcv.txt
inst/extdata/ConsensusOPLSCV_15_koplsCenterKTrTr_KtrTr.txt
inst/extdata/RVConsensusOPLS_avantoptmodel_koplsModel_7_Tp_n8.txt
inst/extdata/ConsensusOPLSCV_40_koplsSensSpec_classvec.txt
inst/extdata/ConsensusOPLSCV_31_koplsRescale_meanV.txt
inst/extdata/ConsensusOPLSCV_30_koplsPredict_Yhat.txt
inst/extdata/ConsensusOPLSCV_17_koplsModel_Sp.txt
inst/extdata/RVConsensusOPLS_6_optModel_Y.txt
inst/extdata/RVConsensusOPLS_ConsensusOPLSCV_Q2Yhat.txt
inst/extdata/ConsensusOPLSCV_35_AllYhat.txt
inst/extdata/ConsensusOPLSCV_09_koplsScale_YScaleObj_X.txt
inst/extdata/demoCode_loadings_VIP_proteo.txt
inst/extdata/RVConsensusOPLS_avantoptmodel_koplsModel_7_Tp_n1.txt
inst/extdata/ConsensusOPLSCV_03_koplsCrossValSet_cvSet_KTrTr.txt
inst/extdata/RVConsensusOPLS_2_bis_Wmat.txt
inst/extdata/ConsensusOPLSCV_25_koplsModel_R2XO.txt
inst/extdata/ConsensusOPLSCV_20_koplsModel_T.txt
inst/extdata/ConsensusOPLSCV_07_koplsScale_YScaleObj_meanV.txt
inst/extdata/RVConsensusOPLS_1_AMat.txt
inst/extdata/ConsensusOPLSCV_04_koplsCrossValSet_cvSet_KTeTr.txt
inst/extdata/ConsensusOPLSCV_14_koplsCenterKTeTr_KteTr.txt
inst/extdata/ConsensusOPLSCV_16_koplsModel_Cp.txt
inst/extdata/ConsensusOPLSCV_33_koplsRescale_X.txt
inst/extdata/ConsensusOPLSCV_26_koplsModel_R2XC.txt
inst/extdata/RVConsensusOPLS_avantoptmodel_koplsModel_7_Tp_n4.txt
inst/extdata/RVConsensusOPLS_5_optModel_W_mat.txt
inst/extdata/RVConsensusOPLS_3_ConsensusOPLSCV_allYhat.txt
inst/extdata/ConsensusOPLSCV_05_koplsCrossValSet_cvSet_KTeTe.txt
inst/extdata/collection_matlab_proteo.txt
inst/extdata/ConsensusOPLSCV_19_koplsModel_Tp.txt
inst/extdata/RVConsensusOPLS_7_optModel_A.txt
inst/extdata/ConsensusOPLSCV_06_koplsCrossValSet_cvSet_yTrain.txt
inst/extdata/ConsensusOPLSCV_28_koplsPredict_to.txt
inst/extdata/RVConsensusOPLS_ConsensusOPLSCV_cvTestIndex.txt
inst/extdata/demoCode_scores.txt
inst/extdata/ConsensusOPLSCV_11_koplsScaleApply_YScaleObjTest_stdV.txt
inst/extdata/ConsensusOPLSCV_21_koplsModel_K.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_22_koplsModel_To.txt
inst/extdata/A=2/A=2/collection_matlab_metabo.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_18_koplsModel_Up.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_37_koplsMaxClassify_predClass.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_08_koplsScale_YScaleObj_stdV.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_13_koplsCenterKTeTe_KteTe.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_36_koplsMaxClassify_predClass.txt
inst/extdata/A=2/A=2/RVConsensusOPLS_2_RV.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_41_koplsSensSpec_tot_sens.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_23_koplsModel_sstot_K.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_24_koplsModel_R2X.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_44_koplsConfusionMatrix_confusionMatrix.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_29_koplsPredict_EEprime.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_02_classVectReDummy.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_32_koplsRescale_stdV.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_10_koplsScaleApply_YScaleObjTest_meanV.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_12_koplsScaleApply_YScaleObjTest_X.txt
inst/extdata/A=2/A=2/VIP_micro.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_38_koplsSensSpec_sens.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_27_koplsPredict_Tp.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_34_YhatDaSave.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_43_koplsSensSpec_meanSpec.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_39_koplsSensSpec_spec.txt
inst/extdata/A=2/A=2/collection_matlab_micro.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_42_koplsSensSpec_meanSens.txt
inst/extdata/A=2/A=2/VIP_proteo.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_15_koplsCenterKTrTr_KtrTr.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_40_koplsSensSpec_classvec.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_31_koplsRescale_meanV.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_30_koplsPredict_Yhat.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_17_koplsModel_Sp.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_35_AllYhat.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_09_koplsScale_YScaleObj_X.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_03_koplsCrossValSet_cvSet_KTrTr.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_25_koplsModel_R2XO.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_20_koplsModel_T.txt
inst/extdata/A=2/A=2/VIP_metabo.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_07_koplsScale_YScaleObj_meanV.txt
inst/extdata/A=2/A=2/RVConsensusOPLS_1_AMat.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_04_koplsCrossValSet_cvSet_KTeTr.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_14_koplsCenterKTeTr_KteTr.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_16_koplsModel_Cp.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_33_koplsRescale_X.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_26_koplsModel_R2XC.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_05_koplsCrossValSet_cvSet_KTeTe.txt
inst/extdata/A=2/A=2/collection_matlab_proteo.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_19_koplsModel_Tp.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_06_koplsCrossValSet_cvSet_yTrain.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_28_koplsPredict_to.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_11_koplsScaleApply_YScaleObjTest_stdV.txt
inst/extdata/A=2/A=2/ConsensusOPLSCV_21_koplsModel_K.txt
build/vignette.rds
tests/testthat.R
tests/testthat/test-demo_3_Omics.R
tests/testthat/test-VIP.R
tests/testthat/test-koplsDummy.R
tests/testthat/test-ConsensusOPLS.R
tests/testthat/test-RVConsensusOPLS.R
tests/testthat/test-koplsKernel.R
vignettes/ConsensusOPLS.Rmd
vignettes/ConsensusOPLS.bib
data/demo_3_Omics.RData
man/plotLoadings.Rd
man/predict.Rd
man/plotR2.Rd
man/ConsensusOPLS-class.Rd
man/plotScores.Rd
man/ConsensusOPLS.Rd
man/plotDQ2.Rd
man/plotVIP.Rd
man/demo_3_Omics.Rd
man/plotContribution.Rd
man/ConsensusOPLS-package.Rd
man/plotQ2.Rd
