Description Usage Arguments Details Examples
FCS File High Level Functions
1 2 | fcs_files.download_fcs_files_stable(UserSession, experiment_id, fcs_files,
directory = getwd(), zip_download = TRUE, timeout = 300)
|
UserSession |
Cytobank UserSession object |
experiment_id |
integer representing an experiment ID |
fcs_files |
vector/list of integers representing a list of FCS file IDs |
directory |
character representing a specific directory to which the file will be downloaded (optional ending directory slash), if left empty, the default will be the current working directory [optional] |
zip_download |
logical representing whether or not to download each file one by one via ZIP download [default] or normal FCS download [optional] |
timeout |
integer representing the request timeout time in seconds [optional] |
fcs_files.download_fcs_files_stable
Apply cluster gate(s) to specific clusters via an integer vector
1 2 3 4 5 6 7 | fcs_files.download_fcs_files_stable(cyto_session, 22, fcs_files=c(1,2,3),
directory="/my/new/download/directory/")
# Authenticate via username/password
cyto_session <- authenticate(site="premium", username="cyril_cytometry", password="cytobank_rocks!")
# Authenticate via auth_token
cyto_session <- authenticate(site="premium", auth_token="my_secret_auth_token")
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