DALY Calculator main window
This function opens the main window of the DALY Calculator.
After initiating the DALY Calculator main window, the following steps have to be followed to calculate DALYs:
Set the ‘Population’ table
Set the ‘Life Expectancy’ table - the default is the standard life expectancy table introduced in the GBD2010 study
Set the input parameters and corresponding distributions and stratification levels
Set the age weighting and time discounting rates
Calculate DALYs !
In order to demonstrate the calculation process of the DALY Calculator, two examples from the foodborne disease burden literature are built-in:
The burden of Taenia solium cysticercosis in Cameroon (Praet et al., 2009)
Congenital toxoplasmosis and DALYs in the Netherlands (Kortbeek et al., 2009)
In the following sections, a brief summary will be given of the functionalities
of the DALY Calculator.
A more comprehensive overview is provided in the DALY Calculator manual,
which is available through the
The DALY Calculator provides the following three menu options:
Load DALY data from file... reads population and epidemiological data from an .RData file (through
Save DALY data to file... saves the population and epidemiological data to an .RData file (through
Reset DALY calculator clears all entered data, and resets the DALY Calculator to its default settings, except for the life expectancy table (through
Exit exits the DALY Calculator, without saving the entered data
Life Expectancy Table... opens the life expectancy table window (through
Options... opens the options window (through
Load examples loads one of the two built-in examples (through
The burden of Neurocysticercosis in West-Cameroon
The burden of Congenital Toxoplasmosis in the Netherlands
Html help opens the HTML help file for the DALY Calculator (cf
DALY Calculator manual (PDF) opens the DALY Calculator Manual (through
Package description opens the HTML help file for the DALY package (cf
DALY Calculator Info shows current version and developers core team
Devleesschauwer B, et al. (2014). Calculating Disability-Adjusted Life Years to quantify burden of disease. International Journal of Public Health 59, 565-569. http://dx.doi.org/10.1007/s00038-014-0552-z
Praet N, Speybroeck N, Manzanedo R, Berkvens D, Nforninwe DN, Zoli A, Quet F, Preux P-M, Carabin H, Geerts S (2009). The disease burden of Taenia solium cysticercosis in Cameroon. PLoS Neglected Tropical Diseases 3(3), e406.
Kortbeek LM, Hofhuis A, Nijhuis CDM, Havelaar AH (2009). Congenital toxoplasmosis and DALYs in the Netherlands. Memorias de Instituto Oswaldo Cruz 104(2), 370-373.
A command-line interface to the DALY Calculator
is available through the following functions:
setPopopens the ‘Population’ window
setLifeExpopens the ‘Life Expectancy’ window
setStdLEsets the standard life expectancy
setDataopens a ‘Data’ window
getDALYinitiates the DALY calculation process and returns the simulated results
sensitivityperforms DALY sensitivity analysis
DALY_listmerges different DALY objects
for a more comprehensive overview of the DALY Calculator
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