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DDD: Diversity-Dependent Diversification
Implements maximum likelihood and bootstrap methods based on the diversity-dependent birth-death process to test whether speciation or extinction are diversity-dependent, under various models including various types of key innovations. See Etienne et al. 2012, Proc. Roy. Soc. B 279: 1300-1309, <DOI:10.1098/rspb.2011.1439>, Etienne & Haegeman 2012, Am. Nat. 180: E75-E89, <DOI:10.1086/667574>, Etienne et al. 2016. Meth. Ecol. Evol. 7: 1092-1099, <DOI:10.1111/2041-210X.12565> and Laudanno et al. 2021. Syst. Biol. 70: 389–407, <DOI:10.1093/sysbio/syaa048>. Also contains functions to simulate the diversity-dependent process.
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Package details |
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| Author | Rampal S. Etienne [aut, cre] (<https://orcid.org/0000-0003-2142-7612>), Bart Haegeman [aut] (<https://orcid.org/0000-0003-2325-4727>), Hanno Hildenbrandt [ctb] (<https://orcid.org/0000-0002-6784-1037>), Giovanni Laudanno [ctb] (<https://orcid.org/0000-0002-2952-3345>) |
| Maintainer | Rampal S. Etienne <r.s.etienne@rug.nl> |
| License | GPL-3 |
| Version | 5.2.2 |
| Package repository | View on CRAN |
| Installation |
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