extractPLAF: Extract PLAF
In DEploid: Deconvolute Mixed Genomes with Unknown Proportions
Description
Usage
Arguments
Value
Note
Examples
Description
Extract population level allele frequency (PLAF) from text file.
Usage
1
extractPLAF(plafFileName)
Arguments
plafFileName
Path of the PLAF text file.
Value
A numeric array of PLAF
Note
The text file must have header, and population level allele frequency
recorded in the "PLAF" field.
Examples
1
2
3
plafFile = system.file("extdata", "labStrains.test.PLAF.txt",
package = "DEploid")
plaf = extractPLAF(plafFile)
DEploid documentation built on April 22, 2020, 1:04 a.m.
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Description Usage Arguments Value Note Examples
Description
Extract population level allele frequency (PLAF) from text file.
Usage
1 | extractPLAF(plafFileName)
|
Arguments
plafFileName |
Path of the PLAF text file. |
Value
A numeric array of PLAF
Note
The text file must have header, and population level allele frequency recorded in the "PLAF" field.
Examples
1 2 3 | plafFile = system.file("extdata", "labStrains.test.PLAF.txt",
package = "DEploid")
plaf = extractPLAF(plafFile)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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