Man pages for DGEobj
Differential Gene Expression (DGE) Analysis Results Data Object
| addItem | Add a data item |
| addItems | Add multiple data items |
| annotateDGEobj | Add annotations |
| as.list.DGEobj | Cast as a simple list |
| baseType | Get the baseType of an internal data item |
| baseTypes | Get a list of the available baseTypes |
| DGEobj-package | DGEobj Package Overview |
| dim.DGEobj | Get the "assay" dimensions (row/genes by col/samples) |
| dimnames.DGEobj | Get the "assay" names (row/genes by col/samples) |
| getAttributes | Get all attributes |
| getBaseType | Retrieve data items by baseType |
| getItem | Retrieve a data item by name |
| getItems | Retrieve multiple data items by name |
| getType | Retrieve data items by type |
| initDGEobj | Initialize with base data (primaryAssayData, row annotations,... |
| initDGEobjDef | Instantiate a class DGEobjDef object. |
| inventory | Retrieve the object inventory |
| newType | Add a new type definition to a DGEobj |
| print.DGEobj | Print the Inventory |
| resetDGEobj | Reset to original data |
| rmItem | Removes a named data item |
| setAttributes | Set attributes |
| showAttributes | Print attributes |
| showMeta | Retrieve the Key/Value metadata attributes that have a... |
| showTypes | Returns and prints the list of all defined types |
| sub-.DGEobj | Subset with square brackets |
| subset.DGEobj | Subset internal row or column data |
