Man pages for DGEobj
Differential Gene Expression (DGE) Analysis Results Data Object

addItemAdd a data item
addItemsAdd multiple data items
annotateDGEobjAdd annotations
as.list.DGEobjCast as a simple list
baseTypeGet the baseType of an internal data item
baseTypesGet a list of the available baseTypes
DGEobj-packageDGEobj Package Overview
dim.DGEobjGet the "assay" dimensions (row/genes by col/samples)
dimnames.DGEobjGet the "assay" names (row/genes by col/samples)
getAttributesGet all attributes
getBaseTypeRetrieve data items by baseType
getItemRetrieve a data item by name
getItemsRetrieve multiple data items by name
getTypeRetrieve data items by type
initDGEobjInitialize with base data (primaryAssayData, row annotations,...
initDGEobjDefInstantiate a class DGEobjDef object.
inventoryRetrieve the object inventory
newTypeAdd a new type definition to a DGEobj
print.DGEobjPrint the Inventory
resetDGEobjReset to original data
rmItemRemoves a named data item
setAttributesSet attributes
showAttributesPrint attributes
showMetaRetrieve the Key/Value metadata attributes that have a...
showTypesReturns and prints the list of all defined types
sub-.DGEobjSubset with square brackets
subset.DGEobjSubset internal row or column data
DGEobj documentation built on April 10, 2021, 1:07 a.m.