DMRMark: DMR Detection by Non-Homogeneous Hidden Markov Model from Methylation Array Data

Perform differential analysis for methylation array data. Detect differentially methylated regions (DMRs) from array M-values. The core is a Non-homogeneous Hidden Markov Model for estimating spatial correlation and a novel Constrained Gaussian Mixture Model for modeling the M-value pairs of each individual locus.

AuthorLinghao SHEN <sl013@ie.cuhk.edu.hk>
Date of publication2016-09-04 20:14:25
MaintainerLinghao SHEN <sl013@ie.cuhk.edu.hk>
LicenseGPL
Version1.0

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