DMRMark: DMR Detection by Non-Homogeneous Hidden Markov Model from Methylation Array Data

Perform differential analysis for methylation array data. Detect differentially methylated regions (DMRs) from array M-values. The core is a Non-homogeneous Hidden Markov Model for estimating spatial correlation and a novel Constrained Gaussian Mixture Model for modeling the M-value pairs of each individual locus.

Package details

AuthorLinghao SHEN <[email protected]>
MaintainerLinghao SHEN <[email protected]>
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:

Try the DMRMark package in your browser

Any scripts or data that you put into this service are public.

DMRMark documentation built on May 30, 2017, 5 a.m.