Man pages for DSAIRM
Dynamical Systems Approach to Immune Response Modeling
| check_simresults | A function that checks if a call to simulation function... |
| dsairmmenu | The main menu for the DSAIRM package |
| DSAIRM-package | DSAIRM: A package to learn about Dynamical Systems Approaches... |
| generate_documentation | A helper function which processes and displays the... |
| generate_fctcall | A helper function that produces a call to a simulator... |
| generate_ggplot | A helper function that takes simulation results and produces... |
| generate_modelsettings | A function to parse modelsettings for simulation runs |
| generate_plotly | A helper function that takes simulation results and produces... |
| generate_shinyinput | A helper function that takes a model and generates shiny UI... |
| generate_text | A helper function that takes result from the simulators and... |
| hayden96flu | Influenza virus load data |
| run_model | A function that runs an app for specific settings and... |
| schirm20strep | Streptococcus pneumoniae infection data |
| simulate_acutevirusir_ode | Acute Virus Infection and IR Model |
| simulate_bacteria_fit | Fitting a simple bacteria infection models to Streptococcus... |
| simulate_basicbacteria_discrete | Basic Bacteria model - discrete |
| simulate_basicbacteria_modelexploration | Simulation to illustrate parameter scan of the basic bacteria... |
| simulate_basicbacteria_ode | Basic Bacteria model - ODE |
| simulate_basicvirus_fit | Fitting a simple viral infection models to influenza data |
| simulate_basicvirus_modelexploration | Simulation to illustrate parameter scan of the basic virus... |
| simulate_basicvirus_ode | Basic Virus Model |
| simulate_basicvirus_stochastic | Basic Virus Model |
| simulate_chronicvirusir_ode | Chronic Virus Infection and IR Model |
| simulate_confint_fit | Fit a simple viral infection model and compute confidence... |
| simulate_drugresistance_stochastic | Stochastic simulation of a compartmental acute virus... |
| simulate_extendedbacteria_ode | Extended Bacteria model - ODE |
| simulate_fludrug_fit | Fitting a simple viral infection model with 2 types of drug... |
| simulate_modelcomparison_fit | Fitting 2 simple viral infection models to influenza data |
| simulate_modelvariants_ode | Simulation of a viral infection model with immune response... |
| simulate_pkpdmodel_ode | PkPd Virus model |
| simulate_usanalysis | Simulation to illustrate uncertainty and sensitivity analysis |
| simulate_virusandir_ode | Simulation of a viral infection model with an immune response |
| simulate_virusandtx_ode | Simulation of a basic viral infection model with drug... |
