DendSer: Dendrogram seriation: ordering for visualisation

Re-arranges a dendrogram to optimize visualisation-based cost functions

Author
Catherine B. Hurley and Denise Earle
Date of publication
2013-09-09 21:15:20
Maintainer
Catherine Hurley <catherine.hurley@nuim.ie>
License
GPL-2
Version
1.0.1

View on CRAN

Man pages

costARc
Cost functions for DendSer
crit2cost
Cost function from seriation criterion
DendSer
Implements dendrogram seriation
dser
Implements dendrogram seriation. Interface to DendSer.
plotAsColor
Function that plots a matrix as a color image

Files in this package

DendSer
DendSer/src
DendSer/src/cpl.c
DendSer/src/clpl.c
DendSer/src/cbar.c
DendSer/src/carct.c
DendSer/NAMESPACE
DendSer/demo
DendSer/demo/sleep.R
DendSer/demo/pottery.R
DendSer/demo/toy.R
DendSer/demo/00Index
DendSer/demo/fib.R
DendSer/R
DendSer/R/DendSer.R
DendSer/R/cost.R
DendSer/R/plotAsColor.R
DendSer/R/node.R
DendSer/R/leafSort.R
DendSer/R/dser.R
DendSer/R/dser2seriate.R
DendSer/MD5
DendSer/DESCRIPTION
DendSer/man
DendSer/man/DendSer.Rd
DendSer/man/dser.Rd
DendSer/man/costARc.Rd
DendSer/man/plotAsColor.Rd
DendSer/man/crit2cost.Rd