Man pages for DiNAMIC.Duo
Finding Recurrent DNA Copy Number Alterations and Differences

cyclicNullRCreate a cyclic shift-based null distribution for one or two...
cyclicShiftColRPerform the cyclic shift procedure on the columns of a matrix
dataPrepPrepare copy number data for downstream analysis
genomeChrPlotA Function for Plotting Mean Copy Number Values and...
genomePlotA Function for Plotting Mean Copy Number Values and...
luadSubsetDNA copy number data for lung adenocarcinoma.
luscSubsetDNA copy number data for lung squamous cell carcinoma.
miniconda_installationPerform necessary tasks when the DiNAMICDuo package is loaded
pDPrepped data for DiNAMIC.Duo.
peelingOneA Function to Apply the Peeling Algorithm in a Single Copy...
peelingOneIterateA Function to Apply the Peeling Algorithm in a Single Copy...
peelingTwoA Function to Apply the Peeling Algorithm in a Two Copy...
peelingTwoIterateA Function to Apply the Peeling Algorithm for Two Copy Number...
resultsProcessProcessing peeling results
DiNAMIC.Duo documentation built on Oct. 1, 2021, 1:08 a.m.