EBS: Exact Bayesian Segmentation

Performs an exact Bayesian segmentation on data and returns the probabilities of breakpoints, an ICL criteria, comparison of change-point location, etc.

AuthorAlice Cleynen
Date of publication2016-06-23 01:05:53
MaintainerAlice Cleynen <alice.cleynen@umontpellier.fr>
LicenseGPL (>= 2)
Version3.1

View on CRAN

Man pages

CardE0: Prior probability of E0

CardMK: Number of segmentations in K segments

Col: Generic function

Col-methods: ~~ Methods for Function 'Col' ~~

CompCredibility: Comparison of two profiles with credibility intervals

Data: Generic function

Data-methods: ~~ Methods for Function 'Data' ~~

EBSBIC: Model Selection by BIC Criterion

EBS-class: Class "EBS"

EBSDistrib: Probability of kth changepoint in a segmentation in K...

EBSegmentation: Exact Bayesian Segmentation for Poisson, Negative Binomial...

EBSICL: Model Selection by Integrated Completed Likelihood criterion

EBSICLProfiles: Model Selection by Integrated Completed Likelihood criterion

EBS-package: Contains funcions that run exact bayesian changepoint methods...

EBSPlotProba: Plot distribution of changepoints of one profile

EBSPlotProbaProfiles: Plot distribution of changepoints of each profile

EBSPostK: Posterior probabilities of the number of segments

EBSPrior: Matrix of prior values for each interval

EBSPriorProfiles: Matrix of prior values for each interval

EBSProfiles: Exact Bayesian Segmentation for multiple profiles

EBSProfiles-class: Class "EBSProfiles"

EBSStatistic: Statistic for Profile Comparison

getCol: Generic function

getCol-methods: ~~ Methods for Function 'getCol' ~~

GetCondition: Segmentation information for one profile out of the set

getData: Generic function

getData-methods: ~~ Methods for Function 'getData' ~~

getHyperParameters: Generic function

getHyperParameters-methods: ~~ Methods for Function 'getHyperParameters' ~~

getKmax: Generic function

getKmax-methods: ~~ Methods for Function 'getKmax' ~~

getLength: Generic function

getLength-methods: ~~ Methods for Function 'getLength' ~~

getLi: Generic function

getLi-methods: ~~ Methods for Function 'getLi' ~~

getModel: Generic function

getModel-methods: ~~ Methods for Function 'getModel' ~~

getOverdispersion: Generic function

getOverdispersion-methods: ~~ Methods for Function 'getOverdispersion' ~~

getP: Generic function

getP-methods: ~~ Methods for Function 'getP' ~~

getPriorm: Generic function

getPriorm-methods: ~~ Methods for Function 'getPriorm' ~~

getVariance: Generic function

getVariance-methods: ~~ Methods for Function 'getVariance' ~~

HyperParameters: Generic function

HyperParameters-methods: ~~ Methods for Function 'HyperParameters' ~~

Kmax: Generic function

Kmax-methods: ~~ Methods for Function 'Kmax' ~~

Length: Generic function

Length-methods: ~~ Methods for Function 'Length' ~~

Li: Generic function

Li-methods: ~~ Methods for Function 'Li' ~~

matProba: Generic function

matProba-methods: ~~ Methods for Function 'matProba' ~~

Model: Generic function

Model-methods: ~~ Methods for Function 'Model' ~~

NbConditions: Generic function

NbConditions-methods: ~~ Methods for Function 'NbConditions' in Package 'EBS' ~~

Overdispersion: Generic function

Overdispersion-methods: ~~ Methods for Function 'Overdispersion' ~~

PriorDistrib: Prior distribution of change-point when uniform prior on...

Priorm: Generic function

Priorm-methods: ~~ Methods for Function 'Priorm' ~~

show-methods: ~~ Methods for Function 'show' in Package 'methods' ~~

TruncPois: Truncated Poisson distribution

Variance: Generic function

Variance-methods: ~~ Methods for Function 'Variance' ~~

Files in this package

EBS
EBS/src
EBS/src/LogGaussienne.h
EBS/src/Observations.h
EBS/src/LogGaussienneHomo.h
EBS/src/LogVector.cpp
EBS/src/MyVector.cpp
EBS/src/Distributions.h
EBS/src/LogPoisson.cpp
EBS/src/Function.cpp
EBS/src/MyVector.h
EBS/src/PriorUnif.cpp
EBS/src/CallEBS.h
EBS/src/LogGaussienne.cpp
EBS/src/Observations.cpp
EBS/src/PriorSize.cpp
EBS/src/Function.h
EBS/src/GeneralFunctions.h
EBS/src/LogBinNeg.cpp
EBS/src/Constants.h
EBS/src/LogGaussienneHomo.cpp
EBS/src/LogMatrix.h
EBS/src/LogMatrix.cpp
EBS/src/GeneralFunctions.cpp
EBS/src/LogBinNeg.h
EBS/src/Distributions.cpp
EBS/src/PriorUnif.h
EBS/src/PriorSize.h
EBS/src/LogVector.h
EBS/src/EBS.cc
EBS/src/CallEBS.cpp
EBS/src/LogPoisson.h
EBS/NAMESPACE
EBS/R
EBS/R/Profiles.R EBS/R/EBS.R
EBS/R/zzz.r
EBS/R/Classes.R
EBS/MD5
EBS/DESCRIPTION
EBS/man
EBS/man/EBSPriorProfiles.Rd EBS/man/EBSProfiles.Rd EBS/man/getHyperParameters.Rd EBS/man/EBSICLProfiles.Rd EBS/man/Overdispersion-methods.Rd EBS/man/getP.Rd EBS/man/Model.Rd EBS/man/Variance-methods.Rd EBS/man/EBSPlotProba.Rd EBS/man/Col-methods.Rd EBS/man/Kmax-methods.Rd EBS/man/getHyperParameters-methods.Rd EBS/man/Data-methods.Rd EBS/man/EBSProfiles-class.Rd EBS/man/NbConditions.Rd EBS/man/PriorDistrib.Rd EBS/man/CardE0.Rd EBS/man/getCol-methods.Rd EBS/man/EBSPostK.Rd EBS/man/getModel-methods.Rd EBS/man/getVariance.Rd EBS/man/getOverdispersion-methods.Rd EBS/man/Li-methods.Rd EBS/man/EBS-package.Rd EBS/man/Col.Rd EBS/man/EBSegmentation.Rd EBS/man/getModel.Rd EBS/man/Length.Rd EBS/man/HyperParameters-methods.Rd EBS/man/getOverdispersion.Rd EBS/man/TruncPois.Rd EBS/man/EBSStatistic.Rd EBS/man/getData-methods.Rd EBS/man/Length-methods.Rd EBS/man/Kmax.Rd EBS/man/getPriorm-methods.Rd EBS/man/getLi.Rd EBS/man/getVariance-methods.Rd EBS/man/GetCondition.Rd EBS/man/Data.Rd EBS/man/matProba-methods.Rd EBS/man/matProba.Rd EBS/man/EBSDistrib.Rd EBS/man/CardMK.Rd EBS/man/EBSBIC.Rd EBS/man/Li.Rd EBS/man/EBSPlotProbaProfiles.Rd EBS/man/CompCredibility.Rd EBS/man/getP-methods.Rd EBS/man/EBS-class.Rd EBS/man/EBSPrior.Rd EBS/man/getLi-methods.Rd EBS/man/NbConditions-methods.Rd EBS/man/getPriorm.Rd EBS/man/getLength-methods.Rd EBS/man/EBSICL.Rd EBS/man/getKmax.Rd EBS/man/Model-methods.Rd EBS/man/getKmax-methods.Rd EBS/man/getData.Rd EBS/man/Priorm-methods.Rd EBS/man/Variance.Rd EBS/man/Priorm.Rd EBS/man/getLength.Rd EBS/man/HyperParameters.Rd EBS/man/show-methods.Rd EBS/man/Overdispersion.Rd EBS/man/getCol.Rd

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