tests/testthat/_snaps/model_functions.md

LNR

Code
  init_chains(LNR_s, particles = 10, cores_per_chain = 1)[[1]]$samples
Output
  $theta_mu
                    [,1]
  m           -0.9685927
  m_lMd        0.7061091
  m_Eneutral   1.4890213
  m_Eaccuracy -1.8150926
  s            0.3304096
  t0          -1.1421557

  $theta_var
  , , 1

                        m        m_lMd   m_Eneutral m_Eaccuracy           s
  m            0.15548530 -0.120772081  0.018078294  0.04633176 -0.04484492
  m_lMd       -0.12077208  0.184889995 -0.009471693 -0.04763271  0.02012377
  m_Eneutral   0.01807829 -0.009471693  0.058583553 -0.01291727 -0.02728142
  m_Eaccuracy  0.04633176 -0.047632707 -0.012917266  0.09477040 -0.01673469
  s           -0.04484492  0.020123770 -0.027281415 -0.01673469  0.07945096
  t0           0.03785971 -0.018083101 -0.008237056  0.01937868 -0.01285052
                        t0
  m            0.037859710
  m_lMd       -0.018083101
  m_Eneutral  -0.008237056
  m_Eaccuracy  0.019378684
  s           -0.012850519
  t0           0.076944459


  $a_half
                   [,1]
  m           0.4056687
  m_lMd       1.9319610
  m_Eneutral  0.2242516
  m_Eaccuracy 0.4969591
  s           0.3334446
  t0          0.2464756

  $alpha
  , , 1

                    as1t       bd6t
  m           -0.6599300 -0.5836701
  m_lMd        0.3772913  0.1802469
  m_Eneutral   1.6147295  1.7008123
  m_Eaccuracy -2.1286744 -1.3967109
  s            0.5289465  0.4253892
  t0          -1.3065202 -1.3823828


  $stage
  [1] "init"

  $subj_ll
             [,1]
  as1t -1119.9841
  bd6t  -849.3553

  $last_theta_var_inv
            [,1]       [,2]       [,3]      [,4]      [,5]      [,6]
  [1,] 17.928942  9.9292394 -2.6234713 -2.086301  5.400555 -5.341685
  [2,]  9.929239 11.9481645  0.3450765  2.123976  2.803122 -2.107418
  [3,] -2.623471  0.3450765 23.5046084  5.314472  8.257526  3.928791
  [4,] -2.086301  2.1239763  5.3144716 14.075925  2.918336 -0.963037
  [5,]  5.400555  2.8031216  8.2575264  2.918336 18.577442  1.253107
  [6,] -5.341685 -2.1074180  3.9287913 -0.963037  1.253107 16.001843

  $idx
  [1] 1
Code
  make_data(p_LNR, design_LNR, n_trials = 10)
Output
      trials subjects        E     S     R        rt
  1        1     as1t    speed  left right 0.6621568
  3        2     as1t    speed  left right 0.2057630
  5        3     as1t    speed  left right 0.2148357
  7        4     as1t    speed  left  left 0.3104419
  9        5     as1t    speed  left  left 0.3391626
  11       6     as1t    speed  left right 0.3029197
  13       7     as1t    speed  left right 1.3993717
  15       8     as1t    speed  left right 0.2306459
  17       9     as1t    speed  left  left 1.1688779
  19      10     as1t    speed  left right 0.4420536
  41      11     as1t  neutral  left right 0.6309831
  43      12     as1t  neutral  left  left 0.2536847
  45      13     as1t  neutral  left right 0.2319419
  47      14     as1t  neutral  left right 0.2159625
  49      15     as1t  neutral  left right 0.3556382
  51      16     as1t  neutral  left  left 0.2119769
  53      17     as1t  neutral  left right 0.2055206
  55      18     as1t  neutral  left right 0.2933270
  57      19     as1t  neutral  left right 0.9621727
  59      20     as1t  neutral  left right 0.2841160
  81      21     as1t accuracy  left right 0.2082286
  83      22     as1t accuracy  left right 1.0291990
  85      23     as1t accuracy  left right 0.2387766
  87      24     as1t accuracy  left right 0.3454905
  89      25     as1t accuracy  left  left 0.3402073
  91      26     as1t accuracy  left right 0.2931404
  93      27     as1t accuracy  left right 0.5631042
  95      28     as1t accuracy  left right 0.2650557
  97      29     as1t accuracy  left right 0.2311833
  99      30     as1t accuracy  left right 0.3249946
  121     31     as1t    speed right  left 0.3348222
  123     32     as1t    speed right  left 0.3124411
  125     33     as1t    speed right right 0.3009970
  127     34     as1t    speed right right 0.3324145
  129     35     as1t    speed right  left 0.2808354
  131     36     as1t    speed right  left 0.5841607
  133     37     as1t    speed right  left 0.2735157
  135     38     as1t    speed right  left 0.2484093
  137     39     as1t    speed right right 0.2299376
  139     40     as1t    speed right  left 0.2606403
  161     41     as1t  neutral right right 0.2842899
  163     42     as1t  neutral right  left 0.2101295
  165     43     as1t  neutral right  left 1.4312545
  167     44     as1t  neutral right  left 0.2745290
  169     45     as1t  neutral right right 0.4214576
  171     46     as1t  neutral right  left 0.2168920
  173     47     as1t  neutral right right 0.2591430
  175     48     as1t  neutral right  left 1.0453442
  177     49     as1t  neutral right  left 0.3268598
  179     50     as1t  neutral right right 0.2522106
  201     51     as1t accuracy right right 2.6889300
  203     52     as1t accuracy right  left 0.2239633
  205     53     as1t accuracy right right 0.3311753
  207     54     as1t accuracy right right 0.3193368
  209     55     as1t accuracy right  left 0.4696293
  211     56     as1t accuracy right  left 0.3360226
  213     57     as1t accuracy right  left 0.4199177
  215     58     as1t accuracy right right 0.7826471
  217     59     as1t accuracy right  left 0.7467092
  219     60     as1t accuracy right right 0.2285965
  21       1     bd6t    speed  left right 0.3521819
  23       2     bd6t    speed  left  left 2.5742499
  25       3     bd6t    speed  left  left 0.2447084
  27       4     bd6t    speed  left right 0.3353470
  29       5     bd6t    speed  left right 0.3184436
  31       6     bd6t    speed  left right 0.4884841
  33       7     bd6t    speed  left right 0.4399945
  35       8     bd6t    speed  left right 0.2215287
  37       9     bd6t    speed  left right 0.2100897
  39      10     bd6t    speed  left right 0.2133570
  61      11     bd6t  neutral  left right 0.2446073
  63      12     bd6t  neutral  left  left 0.3726230
  65      13     bd6t  neutral  left right 0.4092510
  67      14     bd6t  neutral  left  left 0.5294351
  69      15     bd6t  neutral  left right 0.2143891
  71      16     bd6t  neutral  left right 0.9475786
  73      17     bd6t  neutral  left right 0.2133931
  75      18     bd6t  neutral  left right 1.2623103
  77      19     bd6t  neutral  left right 0.4351044
  79      20     bd6t  neutral  left right 0.4247098
  101     21     bd6t accuracy  left  left 0.3207819
  103     22     bd6t accuracy  left right 0.2389074
  105     23     bd6t accuracy  left right 0.2820200
  107     24     bd6t accuracy  left right 0.2198767
  109     25     bd6t accuracy  left right 0.4524300
  111     26     bd6t accuracy  left right 0.2300322
  113     27     bd6t accuracy  left right 0.2416458
  115     28     bd6t accuracy  left right 0.2191954
  117     29     bd6t accuracy  left right 0.6286309
  119     30     bd6t accuracy  left right 0.2628880
  141     31     bd6t    speed right  left 0.6651145
  143     32     bd6t    speed right  left 0.2299034
  145     33     bd6t    speed right right 2.4026591
  147     34     bd6t    speed right right 0.3498691
  149     35     bd6t    speed right right 0.3024430
  151     36     bd6t    speed right  left 0.3085880
  153     37     bd6t    speed right  left 0.2907286
  155     38     bd6t    speed right  left 0.2056963
  157     39     bd6t    speed right  left 0.2142630
  159     40     bd6t    speed right  left 0.4062331
  181     41     bd6t  neutral right  left 0.2521459
  183     42     bd6t  neutral right right 0.5737047
  185     43     bd6t  neutral right  left 0.2679879
  187     44     bd6t  neutral right  left 0.6547885
  189     45     bd6t  neutral right  left 0.7484957
  191     46     bd6t  neutral right  left 0.7427598
  193     47     bd6t  neutral right  left 0.2639333
  195     48     bd6t  neutral right  left 0.2970921
  197     49     bd6t  neutral right  left 0.4422466
  199     50     bd6t  neutral right  left 0.9803098
  221     51     bd6t accuracy right  left 0.7469548
  223     52     bd6t accuracy right right 0.2676699
  225     53     bd6t accuracy right right 1.3892407
  227     54     bd6t accuracy right  left 0.2842021
  229     55     bd6t accuracy right  left 0.3571977
  231     56     bd6t accuracy right  left 0.8165039
  233     57     bd6t accuracy right  left 0.2736779
  235     58     bd6t accuracy right  left 0.4250408
  237     59     bd6t accuracy right  left 0.3621805
  239     60     bd6t accuracy right  left 0.3439226

LBA

Code
  init_chains(LBA_s, particles = 10, cores_per_chain = 1)[[1]]$samples
Output
  $theta_mu
                    [,1]
  v           -0.9685927
  v_lMd        0.7061091
  sv_lMTRUE    1.4890213
  B           -1.8150926
  B_Eneutral   0.3304096
  B_Eaccuracy -1.1421557
  B_lRright    0.1571934
  A           -2.0654072
  t0          -0.4405469

  $theta_var
  , , 1

                         v         v_lMd    sv_lMTRUE             B   B_Eneutral
  v            0.059329585 -0.0104497238 -0.010774234  0.0021450832 -0.018128601
  v_lMd       -0.010449724  0.0559162133 -0.002872401  0.0014127637  0.004728529
  sv_lMTRUE   -0.010774234 -0.0028724006  0.059773323  0.0087906529  0.022576320
  B            0.002145083  0.0014127637  0.008790653  0.0447136854  0.001458968
  B_Eneutral  -0.018128601  0.0047285288  0.022576320  0.0014589675  0.038522063
  B_Eaccuracy  0.018325623  0.0019110134 -0.037503336 -0.0100477306 -0.023423360
  B_lRright   -0.012850266 -0.0030964417  0.020333128  0.0098693855  0.019288722
  A           -0.009137082 -0.0181065189  0.007641907 -0.0029721272  0.008676374
  t0          -0.019762600  0.0006819411  0.001329633  0.0006671515  0.007687211
               B_Eaccuracy    B_lRright            A            t0
  v            0.018325623 -0.012850266 -0.009137082 -0.0197625997
  v_lMd        0.001911013 -0.003096442 -0.018106519  0.0006819411
  sv_lMTRUE   -0.037503336  0.020333128  0.007641907  0.0013296327
  B           -0.010047731  0.009869385 -0.002972127  0.0006671515
  B_Eneutral  -0.023423360  0.019288722  0.008676374  0.0076872108
  B_Eaccuracy  0.078051779 -0.028702651 -0.004381484  0.0022878527
  B_lRright   -0.028702651  0.042243108  0.005224348 -0.0090916441
  A           -0.004381484  0.005224348  0.052137019  0.0067800486
  t0           0.002287853 -0.009091644  0.006780049  0.0477904171


  $a_half
                   [,1]
  v           0.4941231
  v_lMd       2.5931756
  sv_lMTRUE   1.4684537
  B           0.8437531
  B_Eneutral  0.6261293
  B_Eaccuracy 0.8155694
  B_lRright   2.2752573
  A           0.7726374
  t0          0.3149199

  $alpha
  , , 1

                    as1t       bd6t
  v           -0.8659366 -0.8274847
  v_lMd        0.8828966  0.5761732
  sv_lMTRUE    1.4190220  1.7831332
  B           -1.5914170 -1.6746325
  B_Eneutral   0.2736373  0.5774843
  B_Eaccuracy -0.7775480 -1.8565900
  B_lRright    0.1379297  0.5908926
  A           -1.9607101 -2.4159174
  t0          -0.6633743 -0.9088031


  $stage
  [1] "init"

  $subj_ll
             [,1]
  as1t -14281.188
  bd6t  -8083.852

  $last_theta_var_inv
             [,1]      [,2]       [,3]      [,4]       [,5]      [,6]
   [1,] 26.028515  6.224107 -1.3572503 -3.811330   3.070339 -3.657354
   [2,]  6.224107 22.834612  1.1572385 -1.918507  -6.426290 -1.390907
   [3,] -1.357250  1.157238 27.2973400 -2.546630  -9.560950  9.393468
   [4,] -3.811330 -1.918507 -2.5466296 25.241309   4.568563  1.562002
   [5,]  3.070339 -6.426290 -9.5609496  4.568563  46.584345  3.445213
   [6,] -3.657354 -1.390907  9.3934682  1.562002   3.445213 22.028224
   [7,]  8.055800  5.016142 -2.0467420 -8.084231 -16.170739  7.104309
   [8,]  3.587576  8.795323 -1.3430047  1.224921  -4.769682 -1.611160
   [9,] 11.470411  3.049327 -0.4123182 -4.351590  -8.494190 -1.804338
                [,7]        [,8]       [,9]
   [1,]   8.05580010  3.58757606 11.4704105
   [2,]   5.01614235  8.79532339  3.0493269
   [3,]  -2.04674198 -1.34300467 -0.4123182
   [4,]  -8.08423140  1.22492096 -4.3515897
   [5,] -16.17073884 -4.76968243 -8.4941901
   [6,]   7.10430863 -1.61116037 -1.8043382
   [7,]  44.63330665 -0.03626134 14.1866918
   [8,]  -0.03626134 23.94575450 -1.1814287
   [9,]  14.18669184 -1.18142869 30.0158974

  $idx
  [1] 1
Code
  make_data(p_LBA, design_LBA, n_trials = 10)
Output
      trials subjects        E     S     R        rt
  1        1     as1t    speed  left  left 1.4633807
  3        2     as1t    speed  left  left 1.4760285
  5        3     as1t    speed  left  left 1.1592134
  7        4     as1t    speed  left right 1.0073454
  9        5     as1t    speed  left  left 1.1259135
  11       6     as1t    speed  left  left 1.0885685
  13       7     as1t    speed  left  left 0.9759322
  15       8     as1t    speed  left  left 1.5074960
  17       9     as1t    speed  left  left 1.1934289
  19      10     as1t    speed  left  left 1.0744474
  41      11     as1t  neutral  left right 1.0673134
  43      12     as1t  neutral  left right 1.7074722
  45      13     as1t  neutral  left  left 1.9051035
  47      14     as1t  neutral  left  left 2.0398431
  49      15     as1t  neutral  left  left 2.3613085
  51      16     as1t  neutral  left right 1.9783355
  53      17     as1t  neutral  left  left 1.9133404
  55      18     as1t  neutral  left  left 1.5454823
  57      19     as1t  neutral  left right 1.4862452
  59      20     as1t  neutral  left  left 2.0591050
  81      21     as1t accuracy  left  left 2.0299050
  83      22     as1t accuracy  left  left 1.6495790
  85      23     as1t accuracy  left right 1.6319596
  87      24     as1t accuracy  left right 1.3735664
  89      25     as1t accuracy  left right 1.0601139
  91      26     as1t accuracy  left  left 2.1595326
  93      27     as1t accuracy  left  left 2.0660525
  95      28     as1t accuracy  left  left 1.5216962
  97      29     as1t accuracy  left  left 1.2179661
  99      30     as1t accuracy  left right 1.1660569
  121     31     as1t    speed right right 1.2526878
  123     32     as1t    speed right right 1.3612807
  125     33     as1t    speed right  left 1.1081115
  127     34     as1t    speed right right 0.9069431
  129     35     as1t    speed right right 1.3007431
  131     36     as1t    speed right right 1.1144518
  133     37     as1t    speed right right 1.1973887
  135     38     as1t    speed right right 1.2928114
  137     39     as1t    speed right right 1.0390089
  139     40     as1t    speed right right 1.0903481
  161     41     as1t  neutral right right 2.0526427
  163     42     as1t  neutral right right 1.3163763
  165     43     as1t  neutral right  left 1.4552335
  167     44     as1t  neutral right right 1.3787500
  169     45     as1t  neutral right right 2.5690105
  171     46     as1t  neutral right right 2.3174432
  173     47     as1t  neutral right right 1.9109834
  175     48     as1t  neutral right right 2.1595589
  177     49     as1t  neutral right right 1.7756665
  179     50     as1t  neutral right right 1.3533651
  201     51     as1t accuracy right right 1.4120491
  203     52     as1t accuracy right right 1.2279165
  205     53     as1t accuracy right  left 0.8540025
  207     54     as1t accuracy right right 2.2168005
  209     55     as1t accuracy right right 1.5696998
  211     56     as1t accuracy right  left 2.1831008
  213     57     as1t accuracy right  left 1.6599022
  215     58     as1t accuracy right right 1.4069464
  217     59     as1t accuracy right right 1.1379449
  219     60     as1t accuracy right right 1.4788349
  21       1     bd6t    speed  left  left 1.1431110
  23       2     bd6t    speed  left right 1.1568404
  25       3     bd6t    speed  left  left 1.1525343
  27       4     bd6t    speed  left  left 0.8557349
  29       5     bd6t    speed  left  left 1.2749753
  31       6     bd6t    speed  left  left 0.9191639
  33       7     bd6t    speed  left  left 1.1984658
  35       8     bd6t    speed  left right 1.1423907
  37       9     bd6t    speed  left  left 1.3775807
  39      10     bd6t    speed  left  left 1.8239025
  61      11     bd6t  neutral  left  left 1.7628106
  63      12     bd6t  neutral  left right 1.7751813
  65      13     bd6t  neutral  left  left 1.3634590
  67      14     bd6t  neutral  left  left 1.6609535
  69      15     bd6t  neutral  left  left 1.4420837
  71      16     bd6t  neutral  left  left 2.0303752
  73      17     bd6t  neutral  left  left 2.5350163
  75      18     bd6t  neutral  left  left 2.3413114
  77      19     bd6t  neutral  left  left 1.6085614
  79      20     bd6t  neutral  left  left 1.7790590
  101     21     bd6t accuracy  left  left 1.5055781
  103     22     bd6t accuracy  left  left 1.4714349
  105     23     bd6t accuracy  left  left 1.2633969
  107     24     bd6t accuracy  left  left 1.4022881
  109     25     bd6t accuracy  left right 1.5379162
  111     26     bd6t accuracy  left  left 1.2376553
  113     27     bd6t accuracy  left  left 1.3866129
  115     28     bd6t accuracy  left  left 1.5251978
  117     29     bd6t accuracy  left  left 1.0863382
  119     30     bd6t accuracy  left  left 1.4439774
  141     31     bd6t    speed right  left 1.0662231
  143     32     bd6t    speed right right 1.1241908
  145     33     bd6t    speed right right 0.9894373
  147     34     bd6t    speed right right 1.1363703
  149     35     bd6t    speed right right 1.5094163
  151     36     bd6t    speed right right 1.3607508
  153     37     bd6t    speed right  left 2.0314261
  155     38     bd6t    speed right right 1.2109026
  157     39     bd6t    speed right right 1.5667086
  159     40     bd6t    speed right right 1.4264524
  181     41     bd6t  neutral right  left 1.9479597
  183     42     bd6t  neutral right right 1.5346550
  185     43     bd6t  neutral right right 1.5947515
  187     44     bd6t  neutral right right 2.5420919
  189     45     bd6t  neutral right right 1.5466112
  191     46     bd6t  neutral right  left 1.5146953
  193     47     bd6t  neutral right  left 1.9679805
  195     48     bd6t  neutral right right 1.8031439
  197     49     bd6t  neutral right right 1.5779376
  199     50     bd6t  neutral right  left 1.6736543
  221     51     bd6t accuracy right right 1.6805979
  223     52     bd6t accuracy right right 1.5073002
  225     53     bd6t accuracy right right 1.3659314
  227     54     bd6t accuracy right right 1.6692198
  229     55     bd6t accuracy right right 1.0853028
  231     56     bd6t accuracy right  left 1.1938813
  233     57     bd6t accuracy right right 1.8463224
  235     58     bd6t accuracy right  left 1.1581136
  237     59     bd6t accuracy right right 1.1518188
  239     60     bd6t accuracy right right 1.3311090

RDM

Code
  init_chains(RDM_s, particles = 10, cores_per_chain = 1)[[1]]$samples
Output
  $theta_mu
                    [,1]
  v           -0.9685927
  v_lMd        0.7061091
  s_lMTRUE     1.4890213
  B           -1.8150926
  B_Eneutral   0.3304096
  B_Eaccuracy -1.1421557
  B_lRright    0.1571934
  A           -2.0654072
  t0          -0.4405469

  $theta_var
  , , 1

                         v         v_lMd     s_lMTRUE             B   B_Eneutral
  v            0.059329585 -0.0104497238 -0.010774234  0.0021450832 -0.018128601
  v_lMd       -0.010449724  0.0559162133 -0.002872401  0.0014127637  0.004728529
  s_lMTRUE    -0.010774234 -0.0028724006  0.059773323  0.0087906529  0.022576320
  B            0.002145083  0.0014127637  0.008790653  0.0447136854  0.001458968
  B_Eneutral  -0.018128601  0.0047285288  0.022576320  0.0014589675  0.038522063
  B_Eaccuracy  0.018325623  0.0019110134 -0.037503336 -0.0100477306 -0.023423360
  B_lRright   -0.012850266 -0.0030964417  0.020333128  0.0098693855  0.019288722
  A           -0.009137082 -0.0181065189  0.007641907 -0.0029721272  0.008676374
  t0          -0.019762600  0.0006819411  0.001329633  0.0006671515  0.007687211
               B_Eaccuracy    B_lRright            A            t0
  v            0.018325623 -0.012850266 -0.009137082 -0.0197625997
  v_lMd        0.001911013 -0.003096442 -0.018106519  0.0006819411
  s_lMTRUE    -0.037503336  0.020333128  0.007641907  0.0013296327
  B           -0.010047731  0.009869385 -0.002972127  0.0006671515
  B_Eneutral  -0.023423360  0.019288722  0.008676374  0.0076872108
  B_Eaccuracy  0.078051779 -0.028702651 -0.004381484  0.0022878527
  B_lRright   -0.028702651  0.042243108  0.005224348 -0.0090916441
  A           -0.004381484  0.005224348  0.052137019  0.0067800486
  t0           0.002287853 -0.009091644  0.006780049  0.0477904171


  $a_half
                   [,1]
  v           0.4941231
  v_lMd       2.5931756
  s_lMTRUE    1.4684537
  B           0.8437531
  B_Eneutral  0.6261293
  B_Eaccuracy 0.8155694
  B_lRright   2.2752573
  A           0.7726374
  t0          0.3149199

  $alpha
  , , 1

                    as1t       bd6t
  v           -0.8659366 -0.8274847
  v_lMd        0.8828966  0.5761732
  s_lMTRUE     1.4190220  1.7831332
  B           -1.5914170 -1.6746325
  B_Eneutral   0.2736373  0.5774843
  B_Eaccuracy -0.7775480 -1.8565900
  B_lRright    0.1379297  0.5908926
  A           -1.9607101 -2.4159174
  t0          -0.6633743 -0.9088031


  $stage
  [1] "init"

  $subj_ll
             [,1]
  as1t -13319.641
  bd6t  -8344.067

  $last_theta_var_inv
             [,1]      [,2]       [,3]      [,4]       [,5]      [,6]
   [1,] 26.028515  6.224107 -1.3572503 -3.811330   3.070339 -3.657354
   [2,]  6.224107 22.834612  1.1572385 -1.918507  -6.426290 -1.390907
   [3,] -1.357250  1.157238 27.2973400 -2.546630  -9.560950  9.393468
   [4,] -3.811330 -1.918507 -2.5466296 25.241309   4.568563  1.562002
   [5,]  3.070339 -6.426290 -9.5609496  4.568563  46.584345  3.445213
   [6,] -3.657354 -1.390907  9.3934682  1.562002   3.445213 22.028224
   [7,]  8.055800  5.016142 -2.0467420 -8.084231 -16.170739  7.104309
   [8,]  3.587576  8.795323 -1.3430047  1.224921  -4.769682 -1.611160
   [9,] 11.470411  3.049327 -0.4123182 -4.351590  -8.494190 -1.804338
                [,7]        [,8]       [,9]
   [1,]   8.05580010  3.58757606 11.4704105
   [2,]   5.01614235  8.79532339  3.0493269
   [3,]  -2.04674198 -1.34300467 -0.4123182
   [4,]  -8.08423140  1.22492096 -4.3515897
   [5,] -16.17073884 -4.76968243 -8.4941901
   [6,]   7.10430863 -1.61116037 -1.8043382
   [7,]  44.63330665 -0.03626134 14.1866918
   [8,]  -0.03626134 23.94575450 -1.1814287
   [9,]  14.18669184 -1.18142869 30.0158974

  $idx
  [1] 1
Code
  make_data(p_RDM, design_RDM, n_trials = 10)
Output
      trials subjects        E     S     R        rt
  1        1     as1t    speed  left  left 0.9280160
  3        2     as1t    speed  left  left 0.9009727
  5        3     as1t    speed  left  left 1.0128159
  7        4     as1t    speed  left  left 0.9078842
  9        5     as1t    speed  left  left 0.8838565
  11       6     as1t    speed  left  left 0.8349570
  13       7     as1t    speed  left  left 0.8541628
  15       8     as1t    speed  left  left 0.8873348
  17       9     as1t    speed  left  left 1.0874602
  19      10     as1t    speed  left  left 0.9044905
  41      11     as1t  neutral  left right 0.9928104
  43      12     as1t  neutral  left  left 1.4726879
  45      13     as1t  neutral  left  left 1.5136812
  47      14     as1t  neutral  left  left 1.4227448
  49      15     as1t  neutral  left  left 1.3624661
  51      16     as1t  neutral  left  left 1.2007451
  53      17     as1t  neutral  left  left 1.5108485
  55      18     as1t  neutral  left  left 1.1971381
  57      19     as1t  neutral  left  left 1.4237964
  59      20     as1t  neutral  left  left 1.4240631
  81      21     as1t accuracy  left  left 1.1261396
  83      22     as1t accuracy  left  left 1.3806725
  85      23     as1t accuracy  left  left 1.1609113
  87      24     as1t accuracy  left  left 1.3577262
  89      25     as1t accuracy  left right 1.0471066
  91      26     as1t accuracy  left  left 1.1073034
  93      27     as1t accuracy  left  left 1.0989463
  95      28     as1t accuracy  left  left 1.3284815
  97      29     as1t accuracy  left  left 1.0555446
  99      30     as1t accuracy  left  left 1.0741559
  121     31     as1t    speed right right 1.0187293
  123     32     as1t    speed right right 0.9814893
  125     33     as1t    speed right  left 0.8739511
  127     34     as1t    speed right right 0.8109042
  129     35     as1t    speed right right 0.9584358
  131     36     as1t    speed right right 1.1550435
  133     37     as1t    speed right right 0.9387957
  135     38     as1t    speed right right 1.0194077
  137     39     as1t    speed right right 1.2271491
  139     40     as1t    speed right right 0.8929923
  161     41     as1t  neutral right right 1.5256713
  163     42     as1t  neutral right right 2.0518276
  165     43     as1t  neutral right right 1.5871876
  167     44     as1t  neutral right right 1.9652669
  169     45     as1t  neutral right right 1.6067294
  171     46     as1t  neutral right right 1.5536834
  173     47     as1t  neutral right right 1.5169147
  175     48     as1t  neutral right right 1.4231504
  177     49     as1t  neutral right right 1.4704327
  179     50     as1t  neutral right right 1.9840533
  201     51     as1t accuracy right right 1.0845494
  203     52     as1t accuracy right right 1.1063536
  205     53     as1t accuracy right  left 0.7933717
  207     54     as1t accuracy right  left 1.0113856
  209     55     as1t accuracy right right 1.1108572
  211     56     as1t accuracy right right 1.0210001
  213     57     as1t accuracy right right 1.1471407
  215     58     as1t accuracy right right 1.4319051
  217     59     as1t accuracy right right 1.7575233
  219     60     as1t accuracy right right 1.3688643
  21       1     bd6t    speed  left  left 1.0208927
  23       2     bd6t    speed  left  left 0.7744698
  25       3     bd6t    speed  left  left 1.1180789
  27       4     bd6t    speed  left  left 0.7575837
  29       5     bd6t    speed  left  left 1.0709417
  31       6     bd6t    speed  left right 1.1845798
  33       7     bd6t    speed  left right 1.0125895
  35       8     bd6t    speed  left  left 1.0491586
  37       9     bd6t    speed  left  left 0.9465356
  39      10     bd6t    speed  left  left 0.8448592
  61      11     bd6t  neutral  left  left 1.6042024
  63      12     bd6t  neutral  left  left 1.4498685
  65      13     bd6t  neutral  left  left 1.9838021
  67      14     bd6t  neutral  left  left 1.2987800
  69      15     bd6t  neutral  left  left 1.8766217
  71      16     bd6t  neutral  left  left 1.4309855
  73      17     bd6t  neutral  left  left 1.7424045
  75      18     bd6t  neutral  left  left 1.3510569
  77      19     bd6t  neutral  left  left 1.2152129
  79      20     bd6t  neutral  left  left 1.5662376
  101     21     bd6t accuracy  left  left 1.2377503
  103     22     bd6t accuracy  left  left 1.3724097
  105     23     bd6t accuracy  left  left 0.9701447
  107     24     bd6t accuracy  left  left 1.0272444
  109     25     bd6t accuracy  left  left 1.4612821
  111     26     bd6t accuracy  left  left 1.0618854
  113     27     bd6t accuracy  left  left 1.0677462
  115     28     bd6t accuracy  left  left 1.3346883
  117     29     bd6t accuracy  left  left 1.8494961
  119     30     bd6t accuracy  left  left 1.4070013
  141     31     bd6t    speed right right 0.9957356
  143     32     bd6t    speed right right 1.1446996
  145     33     bd6t    speed right right 1.3102483
  147     34     bd6t    speed right  left 0.9437308
  149     35     bd6t    speed right right 1.1165105
  151     36     bd6t    speed right right 0.9776703
  153     37     bd6t    speed right right 0.7328950
  155     38     bd6t    speed right right 1.0700732
  157     39     bd6t    speed right right 1.1634011
  159     40     bd6t    speed right right 0.9587314
  181     41     bd6t  neutral right right 1.2750007
  183     42     bd6t  neutral right right 1.7700724
  185     43     bd6t  neutral right right 1.7163212
  187     44     bd6t  neutral right right 1.6584146
  189     45     bd6t  neutral right right 1.2373955
  191     46     bd6t  neutral right right 1.4939404
  193     47     bd6t  neutral right right 1.6174103
  195     48     bd6t  neutral right right 1.4643984
  197     49     bd6t  neutral right right 1.4014406
  199     50     bd6t  neutral right right 1.7699586
  221     51     bd6t accuracy right right 1.2711660
  223     52     bd6t accuracy right right 1.3422554
  225     53     bd6t accuracy right right 1.2014337
  227     54     bd6t accuracy right right 1.2291637
  229     55     bd6t accuracy right right 1.8717891
  231     56     bd6t accuracy right right 1.2700290
  233     57     bd6t accuracy right right 1.4387550
  235     58     bd6t accuracy right right 1.1099540
  237     59     bd6t accuracy right right 0.9106558
  239     60     bd6t accuracy right  left 1.4617551

DDM

Code
  init_chains(DDM_s, particles = 10, cores_per_chain = 1)[[1]]$samples
Output
  $theta_mu
                    [,1]
  v_Sleft     -0.9685927
  v_Sright     0.7061091
  a            1.4890213
  a_Eneutral  -1.8150926
  a_Eaccuracy  0.3304096
  t0          -1.1421557
  Z            0.1571934
  sv          -2.0654072
  SZ          -0.4405469

  $theta_var
  , , 1

                   v_Sleft      v_Sright            a    a_Eneutral  a_Eaccuracy
  v_Sleft      0.059329585 -0.0104497238 -0.010774234  0.0021450832 -0.018128601
  v_Sright    -0.010449724  0.0559162133 -0.002872401  0.0014127637  0.004728529
  a           -0.010774234 -0.0028724006  0.059773323  0.0087906529  0.022576320
  a_Eneutral   0.002145083  0.0014127637  0.008790653  0.0447136854  0.001458968
  a_Eaccuracy -0.018128601  0.0047285288  0.022576320  0.0014589675  0.038522063
  t0           0.018325623  0.0019110134 -0.037503336 -0.0100477306 -0.023423360
  Z           -0.012850266 -0.0030964417  0.020333128  0.0098693855  0.019288722
  sv          -0.009137082 -0.0181065189  0.007641907 -0.0029721272  0.008676374
  SZ          -0.019762600  0.0006819411  0.001329633  0.0006671515  0.007687211
                        t0            Z           sv            SZ
  v_Sleft      0.018325623 -0.012850266 -0.009137082 -0.0197625997
  v_Sright     0.001911013 -0.003096442 -0.018106519  0.0006819411
  a           -0.037503336  0.020333128  0.007641907  0.0013296327
  a_Eneutral  -0.010047731  0.009869385 -0.002972127  0.0006671515
  a_Eaccuracy -0.023423360  0.019288722  0.008676374  0.0076872108
  t0           0.078051779 -0.028702651 -0.004381484  0.0022878527
  Z           -0.028702651  0.042243108  0.005224348 -0.0090916441
  sv          -0.004381484  0.005224348  0.052137019  0.0067800486
  SZ           0.002287853 -0.009091644  0.006780049  0.0477904171


  $a_half
                   [,1]
  v_Sleft     0.4941231
  v_Sright    2.5931756
  a           1.4684537
  a_Eneutral  0.8437531
  a_Eaccuracy 0.6261293
  t0          0.8155694
  Z           2.2752573
  sv          0.7726374
  SZ          0.3149199

  $alpha
  , , 1

                      as1t        bd6t
  v_Sleft     -0.795745564 -0.61298014
  v_Sright     0.831296796  0.53982132
  a            1.424407847  1.19546709
  a_Eneutral  -1.922987294 -1.62502932
  a_Eaccuracy  0.049542401  0.03054263
  t0          -1.396100362 -1.38269638
  Z           -0.005054203 -0.21436007
  sv          -2.197044667 -2.08693786
  SZ          -0.436668005 -0.46579217


  $stage
  [1] "init"

  $subj_ll
            [,1]
  as1t -3601.088
  bd6t -3112.817

  $last_theta_var_inv
             [,1]      [,2]       [,3]      [,4]       [,5]      [,6]
   [1,] 26.028515  6.224107 -1.3572503 -3.811330   3.070339 -3.657354
   [2,]  6.224107 22.834612  1.1572385 -1.918507  -6.426290 -1.390907
   [3,] -1.357250  1.157238 27.2973400 -2.546630  -9.560950  9.393468
   [4,] -3.811330 -1.918507 -2.5466296 25.241309   4.568563  1.562002
   [5,]  3.070339 -6.426290 -9.5609496  4.568563  46.584345  3.445213
   [6,] -3.657354 -1.390907  9.3934682  1.562002   3.445213 22.028224
   [7,]  8.055800  5.016142 -2.0467420 -8.084231 -16.170739  7.104309
   [8,]  3.587576  8.795323 -1.3430047  1.224921  -4.769682 -1.611160
   [9,] 11.470411  3.049327 -0.4123182 -4.351590  -8.494190 -1.804338
                [,7]        [,8]       [,9]
   [1,]   8.05580010  3.58757606 11.4704105
   [2,]   5.01614235  8.79532339  3.0493269
   [3,]  -2.04674198 -1.34300467 -0.4123182
   [4,]  -8.08423140  1.22492096 -4.3515897
   [5,] -16.17073884 -4.76968243 -8.4941901
   [6,]   7.10430863 -1.61116037 -1.8043382
   [7,]  44.63330665 -0.03626134 14.1866918
   [8,]  -0.03626134 23.94575450 -1.1814287
   [9,]  14.18669184 -1.18142869 30.0158974

  $idx
  [1] 1
Code
  make_data(p_DDM, design_DDM, n_trials = 10)
Output
      trials subjects        E     S     R        rt
  1        1     as1t    speed  left right 0.3303770
  2        2     as1t    speed  left right 0.8831889
  3        3     as1t    speed  left right 0.3656491
  4        4     as1t    speed  left right 1.6893529
  5        5     as1t    speed  left right 0.3581243
  6        6     as1t    speed  left  left 0.5084518
  7        7     as1t    speed  left  left 0.3417613
  8        8     as1t    speed  left  left 0.4125840
  9        9     as1t    speed  left  left 0.3481593
  10      10     as1t    speed  left  left 0.4733514
  21      11     as1t  neutral  left right 0.4909576
  22      12     as1t  neutral  left right 2.8947302
  23      13     as1t  neutral  left right 0.8124359
  24      14     as1t  neutral  left right 1.8901699
  25      15     as1t  neutral  left right 2.7489752
  26      16     as1t  neutral  left right 0.4256045
  27      17     as1t  neutral  left right 3.4726118
  28      18     as1t  neutral  left right 2.2478788
  29      19     as1t  neutral  left right 1.5915899
  30      20     as1t  neutral  left right 1.0245526
  41      21     as1t accuracy  left  left 1.0479779
  42      22     as1t accuracy  left  left 0.5282694
  43      23     as1t accuracy  left  left 1.3204855
  44      24     as1t accuracy  left  left 1.6058679
  45      25     as1t accuracy  left  left 0.4258507
  46      26     as1t accuracy  left  left 0.4895823
  47      27     as1t accuracy  left  left 0.4842132
  48      28     as1t accuracy  left  left 0.4517332
  49      29     as1t accuracy  left  left 0.3808616
  50      30     as1t accuracy  left  left 0.6778753
  61      31     as1t    speed right right 0.9071700
  62      32     as1t    speed right right 0.6793971
  63      33     as1t    speed right right 0.3469793
  64      34     as1t    speed right right 0.4637350
  65      35     as1t    speed right right 0.7313425
  66      36     as1t    speed right right 1.1579094
  67      37     as1t    speed right right 0.8025322
  68      38     as1t    speed right right 0.9046728
  69      39     as1t    speed right right 0.7982492
  70      40     as1t    speed right right 0.4230500
  81      41     as1t  neutral right right 0.5534460
  82      42     as1t  neutral right right 1.9699515
  83      43     as1t  neutral right right 0.3657847
  84      44     as1t  neutral right right 0.7200108
  85      45     as1t  neutral right right 2.9431948
  86      46     as1t  neutral right right 0.5594162
  87      47     as1t  neutral right right 0.6294693
  88      48     as1t  neutral right right 0.4074717
  89      49     as1t  neutral right right 0.6187583
  90      50     as1t  neutral right right 0.5283952
  101     51     as1t accuracy right right 0.3749035
  102     52     as1t accuracy right right 0.4027881
  103     53     as1t accuracy right right 1.5428381
  104     54     as1t accuracy right right 0.4537814
  105     55     as1t accuracy right right 2.2745643
  106     56     as1t accuracy right right 4.0389529
  107     57     as1t accuracy right right 0.3761582
  108     58     as1t accuracy right right 0.4227407
  109     59     as1t accuracy right right 0.4344785
  110     60     as1t accuracy right right 0.9497076
  11       1     bd6t    speed  left  left 1.4717633
  12       2     bd6t    speed  left  left 1.0776926
  13       3     bd6t    speed  left  left 0.3693564
  14       4     bd6t    speed  left  left 0.6959749
  15       5     bd6t    speed  left  left 0.7347282
  16       6     bd6t    speed  left  left 0.3646702
  17       7     bd6t    speed  left  left 0.2684499
  18       8     bd6t    speed  left  left 0.6802333
  19       9     bd6t    speed  left  left 0.6389701
  20      10     bd6t    speed  left  left 0.4499327
  31      11     bd6t  neutral  left  left 0.6874736
  32      12     bd6t  neutral  left  left 0.3934022
  33      13     bd6t  neutral  left  left 0.4082299
  34      14     bd6t  neutral  left  left 0.8149864
  35      15     bd6t  neutral  left  left 0.4621112
  36      16     bd6t  neutral  left  left 0.3725699
  37      17     bd6t  neutral  left  left 0.5502110
  38      18     bd6t  neutral  left  left 0.9527539
  39      19     bd6t  neutral  left  left 0.4917955
  40      20     bd6t  neutral  left  left 0.4793544
  51      21     bd6t accuracy  left  left 1.0537704
  52      22     bd6t accuracy  left  left 0.4094596
  53      23     bd6t accuracy  left  left 0.3449287
  54      24     bd6t accuracy  left  left 2.8110175
  55      25     bd6t accuracy  left  left 0.7988648
  56      26     bd6t accuracy  left  left 0.9140120
  57      27     bd6t accuracy  left  left 0.3805231
  58      28     bd6t accuracy  left  left 0.7978483
  59      29     bd6t accuracy  left  left 0.3575846
  60      30     bd6t accuracy  left  left 0.5587221
  71      31     bd6t    speed right right 0.3907740
  72      32     bd6t    speed right right 0.5320822
  73      33     bd6t    speed right right 0.4305415
  74      34     bd6t    speed right right 0.3395347
  75      35     bd6t    speed right right 0.5596542
  76      36     bd6t    speed right  left 0.8256122
  77      37     bd6t    speed right  left 1.4658427
  78      38     bd6t    speed right  left 1.0483318
  79      39     bd6t    speed right  left 0.9526109
  80      40     bd6t    speed right  left 1.2686524
  91      41     bd6t  neutral right right 1.5654954
  92      42     bd6t  neutral right right 1.9132725
  93      43     bd6t  neutral right right 0.9740539
  94      44     bd6t  neutral right right 1.4220989
  95      45     bd6t  neutral right right 2.7096758
  96      46     bd6t  neutral right  left 0.7497683
  97      47     bd6t  neutral right  left 0.7829036
  98      48     bd6t  neutral right  left 0.6153065
  99      49     bd6t  neutral right  left 0.5878070
  100     50     bd6t  neutral right  left 0.8849102
  111     51     bd6t accuracy right  left 0.4916132
  112     52     bd6t accuracy right  left 1.4053846
  113     53     bd6t accuracy right  left 1.6644347
  114     54     bd6t accuracy right  left 0.4641608
  115     55     bd6t accuracy right  left 1.2168195
  116     56     bd6t accuracy right  left 0.8745154
  117     57     bd6t accuracy right  left 0.8632338
  118     58     bd6t accuracy right  left 1.9666107
  119     59     bd6t accuracy right  left 1.6759381
  120     60     bd6t accuracy right  left 1.1267937


Try the EMC2 package in your browser

Any scripts or data that you put into this service are public.

EMC2 documentation built on Dec. 2, 2025, 9:06 a.m.