A dataset describing the parameters to be used for each output of each disease report for all 53 health topics included in TESSy

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A data frame with 53 rows (corresponding to the 53 health topics) and 24 variables:

- HealthTopic
Disease code that should match with the health topic code from the disease-specific dataset e.g.

`ANTH`

,`SALM`

, etc.- DG
(optional) Disease group e.g. FWD

- DP
(optional) Disease programme e.g. FWD

- Label
Disease label to be used in the report e.g. salmonellosis, anthrax

- FrequencyCategory
(optional) Frequency of the disease e.g.

`VERY RARE`

,`NON-RARE`

, etc.- MeasurePopulation
Type of population presented for this disease i.e.

`ALL`

or`CONFIRMED`

cases- DatePublicAtlas
Date of latest availability in the public access of the Atlas

- TableUse
Type of table to present in the report i.e.

`NO`

table,`ASR`

table presenting age-standardised rates,`RATE`

table presenting rates or`COUNT`

table presenting the number of cases only.- TableRatesLabel
Label to use in the table for rates e.g.

`RATE PER 100000 POPULATION`

- TableRatesNoDecimals
Number of decimals to use when presenting rates

- TableASRNoDecimals
Number of descimals to use when presenting ASR

- AgeGenderUse
Type of age and gender bar graph to present i.e.

`NO`

graph,`AG-COUNT`

Bar graph presenting the number of cases by age and gender,`AG-RATE`

Bar graph presenting the rates of cases by age and gender,`AG-PROP`

Bar graph presenting the proportion of cases by age and gender,`A-RATE`

Bar graph presenting the rates of cases by age.- AgeGenderBarGraphLabel
Label to use in the age and gender bar graph

- AgeGenderGraphNoDecimals
Number of decimals to use when presenting rates in the age and gender bar graph

- TSTrendGraphUse
Logical Y/N specifying whether to include a line graph describing the trend of the disease over the time

- TSSeasonalityGraphUse
Logical Y/N specifying whether to include a line graph describing the seasonality of the disease

- TSSpecific
Logical Y/N for specific line graph inclusion

- MapNumbersUse
Logical Y/N specifying whether to include the map presenting the number of cases by Member State

- MapRatesUse
Logical Y/N specifying whether to include the map presenting the rates of cases by Member State

- MapRatesNoDecimals
(optional) Number of decimals to use for presenting maps

- MapASRUse
Logical Y/N specifying whether to include the map presenting the age-standardised rates of cases by Member State

- MapASRNoDecimals
(optional) Number of decimals to use for presenting maps

- Transmission
Not implemented yet

- TransmissionNoDecimals
Not implemented yet

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