tree_clock2: BEAST2 phylogenetic tree with clock rates from partition 2

In EvoPhylo: Pre- And Postprocessing of Morphological Data from Relaxed Clock Bayesian Phylogenetics

BEAST2 phylogenetic tree with clock rates from partition 2

Description

A clock Bayesian phylogenetic tree with clock rates from a single clock partition (partition 2 here), imported as an S4 class object using treeio::read.beast().

Usage

data("tree_clock2")

Format

A tidytree object.

Details

This example tree file was produced by analyzing the data set with a single morphological partition from

See Also

tree_clock1 for another BEAST2 tree object with clock rates from partition 1 for this same dataset.

tree3p for another tree object with 3 clock partitions from Mr.Bayes.

tree1p for another tree object with a single clock from Mr.Bayes.

get_clockrate_table_BEAST2 for extratcing the poserior clock rates from BEAST2 tree objects.

EvoPhylo documentation built on Nov. 4, 2022, 1:06 a.m.