medianFilter: 1D Median Filter

In FBN: FISH Based Normalization and Copy Number Inference of SNP Microarray Data

1D Median Filter

Description

1-dimensinal median filter with a specified windowSize of the inputData

Usage

medianFilter(inputData, windowSize)
medianFilter(inputData = NULL, windowSize = 3)

Arguments

inputData	The vector of values to be filtered
windowSize	The half-size of the filtering window (default windowSize = 3)

Details

Classical implementation of a median filter, using a sliding window. By default, the half-size of the sliding window is set to 3 unless otherwise specified.

Value

The output data has the same size of the input data. If the window half-size is smaller or equal to 1, then the input data is passed directly to the output data.

Author(s)

Adrian Andronache [e-mail]
Luca Agnelli [e-mail]

Examples

x <- medianFilter(c(0, 0, 0, 1, 1, 1, 0, 0, 1, 0))
x <- medianFilter(c(0, 0, 0, 1, 0, 0, 0, 0, 1, 0), windowSize = 5)

FBN documentation built on July 9, 2023, 5:18 p.m.