FSA: Simple Fisheries Stock Assessment Methods
Version 0.8.13

A variety of simple fish stock assessment methods. Detailed vignettes are available on the fishR website .

Browse man pages Browse package API and functions Browse package files

AuthorDerek Ogle [aut, cre]
Date of publication2017-04-29 13:28:50 UTC
MaintainerDerek Ogle <derek@derekogle.com>
LicenseGPL (>= 2)
Version0.8.13
URL https://github.com/droglenc/FSA
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("FSA")

Man pages

addRadCap: Add a total radius-at-capture variable to a data.frame that...
addZeroCatch: Adds zeros for catches of species not collected in some...
ageBias: Compute and view possible differnces between paired sets of...
agePrecision: Compute measures of precision among sets of ages.
alkAgeDist: Proportions-at-age from an Age-Length Key
alkIndivAge: Use an age-length key to assign age to individuals in the...
alkMeanVar: Mean Values-at-age from an Age-Length Key
alkPlot: Plots to visualize age-length keys.
bcFuns: Creates a function for a specific back-calculation model.
binCI: Confidence intervals for binomial probability of success.
BluegillJL: Capture histories (2 samples) of Bluegill from Jewett Lake,...
bootCase: Associated S3 methods for bootCase from car.
BrookTroutTH: Catch-at-age for Tobin Harbor, Isle Royale Brook Trout.
capHistConvert: Convert between capture history data.frame formats.
capHistSum: Summarize capture histories in individual fish format.
catchCurve: Mortality estimates from the descending limb of a catch...
chapmanRobson: Computes Chapman-Robson estimates of S and Z.
ChinookArg: Lengths and weights for Chinook Salmon from three locations...
chooseColors: Create a list of colors from among a variety of color...
CodNorwegian: Stock and recruitment data for Norwegian cod, 1937-1960.
col2rgbt: Converts an R color to RGB (red/green/blue) including a...
compIntercepts: Tests for significant differences among all pairs of...
compSlopes: Tests for significant differences among all pairs of slopes...
CutthroatAL: Capture histories (9 samples) of Cutthroat Trout from Auke...
depletion: Computes the Leslie or DeLury population estimate from catch...
diags: Extract diagonals from a matrix.
dunnTest: Dunn's Kruskal-Wallis Multiple Comparisons.
Ecoli: Population growth of Escherichia coli.
expandCounts: Repeat individual fish data (including lengths) from tallied...
expandLenFreq: Expands a length frequency based on a subsample.
extraTests: Likelihood ratio and extra sum-of-squares tests.
fact2num: Converts "numeric" factor levels to numeric values.
fishR: Opens web pages associated with the fishR website.
fitPlot: Fitted model plot for an lm, glm, or nls object.
FSA: Fisheries stock assessment methods and data.
FSA-internals: Internal functions.
fsaNews: Read news and changes for the 'FSA' package.
FSAUtils: Capitalizes the first letter of first or all words in a...
gConvert: Converts between types of measurements from calcified...
geomean: Calculates the geometric mean or geometric standard...
growthModels: Creates a function for a specific parameterization of the von...
headtail: Shows rows from the head and tail of a data frame or matrix.
hist.formula: Creates separate histograms by levels.
histFromSum: Create a histogram from a frequency table.
hoCoef: Performs a hypothesis test that a linear model parameter is...
hyperCI: Confidence interval for population size (N) in hypergeometric...
knitUtil: Specific utilities for use in a knitr document.
ksTest: Kolmogorov-Smirnov Tests.
lagratio: Ratio of lagged observations.
lencat: Constructs length class/category variable.
logbtcf: Constructs the correction-factor used when back-transforming...
lwCompPreds: Constructs plots of predicted weights at given lengths among...
mapvalues: Replace specified values in a vector or factor with new...
metaM: Estimate natural mortality from a variety of empirical...
Mirex: Mirex concentration, weight, capture year, and species of...
mrClosed: Estimate initial population size for single or multiple...
mrOpen: Jolly-Seber analysis from multiple mark-recapture events from...
nlsBoot: Associated S3 methods for nlsBoot from nlstools.
nlsTracePlot: Adds model fits from nls iterations to active plot.
oddeven: Determine if a number is odd or even.
perc: Computes the percentage of values in a vector less than or...
PikeNY: Summarized multiple mark-recapture data for all Northern Pike...
PikeNYPartial1: Capture histories (4 samples), in capture history format, of...
plotBinResp: Plots a binary response variable versus a quantitative...
poiCI: Confidence interval for Poisson counts.
psdAdd: Creates a vector of Gabelhouse lengths for each species in an...
psdCalc: Convenience function for calculating PSD-X and PSD X-Y...
psdCI: Compute confidence intervals for PSD-X and PSD X-Y values.
PSDlit: Gabelhouse five-cell length categories for various species.
psdPlot: Length-frequency histogram with Gabelhouse lengths...
psdVal: Finds Gabelhouse lengths (for PSD calculations) for a...
rcumsum: Computes the prior to or reverse cumulative sum of a vector.
removal: Population estimates for k-, 3-, or 2-pass removal data.
residPlot: Construct a residual plot from lm or nls objects.
Schnute: The four-parameter growth function from Schnute (1981).
se: Computes standard error of the mean.
SMBassLS: Catch-effort data for Little Silver Lake (Ont) Smallmouth...
SMBassWB: Growth increment data for West Bearskin Lake, MN, Smallmouth...
SpotVA1: Age and length of spot.
srStarts: Finds reasonable starting values for parameters in specific...
stockRecruitment: Creates a function for a specific parameterization of a...
Subset: Subsets/filters a data frame and drops the unused levels.
Summarize: Summary statistics for a numeric variable.
sumTable: Creates a one- or two-way table of summary statistics.
tictactoe: Construct a base tic-tac-toe plot for presenting...
validn: Finds the number of valid (non-NA) values in a vector.
vbStarts: Find reasonable starting values for a von Bertalanffy growth...
WhitefishLC: Assigned ages from two readers on three structures for Lake...
WR79: Ages and lengths for a hypothetical sample from Westerheim...
wrAdd: Computes a vector of relative weights specific to a species...
WSlit: All known standard weight equations.
wsVal: Finds standard weight equation coefficients for a particular...

Functions

.onAttach Man page
BluegillJL Man page
BrookTroutTH Man page
ChinookArg Man page
CodNorwegian Man page
CutthroatAL Man page
Ecoli Man page
FSA Man page
FSA-package Man page
FSANews Man page Man page Source code
FSAUtils Man page
GompertzFuns Man page Source code
Mirex Man page
Mmethods Man page Source code
PSDlit Man page
PikeNY Man page
PikeNYPartial1 Man page
RichardsFuns Man page Source code
SMBassLS Man page
SMBassWB Man page
STOP Man page Source code
Schnute Man page Source code
SpotVA1 Man page
Subset Man page Man page Source code
Summarize Man page Source code
Summarize.default Man page Man page Source code
Summarize.formula Man page Man page Source code
WARN Man page Source code
WR79 Man page
WSlit Man page
WhitefishLC Man page
addRadCap Man page Source code
addZeroCatch Man page Source code
ageBias Man page Source code
agePrecision Man page Source code
alkAgeDist Man page Source code
alkIndivAge Man page Source code
alkMeanVar Man page Source code
alkPlot Man page Source code
anova.catchCurve Man page Man page Source code
anova.depletion Man page Man page Source code
bcFuns Man page Source code
bcUtilChecker Source code
binCI Man page Source code
bootstrap Man page
capFirst Man page Source code
capHistConvert Man page Source code
capHistSum Man page Source code
catchCurve Man page Source code
catchCurve.default Man page Man page Source code
catchCurve.formula Man page Man page Source code
chapmanRobson Man page Source code
chapmanRobson.default Man page Man page Source code
chapmanRobson.formula Man page Man page Source code
chooseColors Man page Source code
coef.catchCurve Man page Man page Source code
coef.chapmanRobson Man page Source code
coef.depletion Man page Man page Source code
col2rgbt Man page Source code
compIntercepts Man page Source code
compSlopes Man page Source code
confint.bootCase Man page Source code
confint.catchCurve Man page Man page Source code
confint.chapmanRobson Man page Man page Source code
confint.depletion Man page Man page Source code
confint.mrClosed1 Man page Man page Source code
confint.mrClosed2 Man page Man page Source code
confint.mrOpen Man page Man page Source code
confint.nlsBoot Man page Source code
confint.nlsboot Man page
confint.removal Man page Man page Source code
depletion Man page Source code
diags Man page Source code
dunnTest Man page Source code
dunnTest.default Man page Man page Source code
dunnTest.formula Man page Man page Source code
expandCounts Man page Source code
expandLenFreq Man page Source code
extraSS Man page Source code
extraTests Man page
fact2num Man page Source code
filterD Man page Source code
fishR Man page Source code
fitPlot Man page Source code
fitPlot.IVR Man page Man page Source code
fitPlot.ONEWAY Man page Man page Source code
fitPlot.POLY Man page Man page Source code
fitPlot.SLR Man page Man page Source code
fitPlot.TWOWAY Man page Man page Source code
fitPlot.glm Man page Man page Source code
fitPlot.lm Man page Man page Source code
fitPlot.logreg Man page Man page Source code
fitPlot.nls Man page Man page Source code
fsaNews Man page Source code
gConvert Man page Source code
geomean Man page Source code
geosd Man page Man page Source code
growthFunShow Man page Source code
growthModels Man page
headtail Man page Source code
hist.bootCase Man page Man page Source code
hist.formula Man page Source code
histFromSum Man page Source code
histFromSum.default Man page Man page Source code
histFromSum.formula Man page Man page Source code
histFromSum.table Man page Man page Source code
hoCoef Man page Source code
htest Man page Source code
htest.bootCase Man page Man page Source code
htest.nlsBoot Man page Source code
hyperCI Man page Source code
iABAddXHist Source code
iABAddYHist Source code
iABAxisLbls Source code
iABAxisLmts Source code
iABSetLayout Source code
iALKAgeProp Source code
iALKMean.BM Source code
iALKMean.QD Source code
iALKPlotArea Source code
iALKPlotBar Source code
iALKPlotBubble Source code
iALKPlotLines Source code
iALKPlotSplines Source code
iAddLegend Source code
iAddLoessLine Man page Source code
iAddOutlierTestResults Source code
iAddPSDLeg Source code
iAdjKey4xlim Source code
iAgeBiasDF Source code
iAgeKey.CR Source code
iAgeKey.SR Source code
iBarplotAddLabelsToBars Source code
iBowker Source code
iBubbleFindIn Source code
iBubbleUnmatKey Source code
iBubblesAdd Source code
iCI.CheckParm Source code
iCI.MRCSingle Source code
iCI1.HandleSuggested Source code
iCI1.HandleVerbose Source code
iCI2.HandleSuggested Source code
iCI2.MRCSchnabel Source code
iCI2.MRCSchumacher Source code
iCIBoot Source code
iCILabel Man page Source code
iCIfp Source code
iCIfp1 Source code
iCIt Source code
iCalc_tpr Source code
iCalcr Source code
iCalcz Source code
iCapFirst Source code
iCarleStrub Source code
iCheckALK Man page Source code
iCheckCatchEffort Source code
iCheckIndvec Source code
iCheckK Source code
iCheckLinf Source code
iCheckMBbot Source code
iCheckMBtop Source code
iCheckPtbl Source code
iCheckRegSig Source code
iCheckStartcat Source code
iCheckStartcatW Man page Source code
iCheckW Source code
iCheck_K Source code
iCheck_L Source code
iCheck_Linf Source code
iCheck_Temp Source code
iCheck_Winf Source code
iCheck_ages2use Source code
iCheck_b Source code
iCheck_t0 Source code
iCheck_t50 Source code
iCheck_tmax Source code
iChk4Geos Source code
iChkComplexModel Source code
iChkCumSum Source code
iDeLury Source code
iDiffAB Source code
iDiffBA Source code
iEstB Source code
iEstM Source code
iEstN Source code
iEstPhi Source code
iEvansHoenig Source code
iEvent2Indiv Source code
iExpandCHString Source code
iExtractComparisons Source code
iExtractSlopes Source code
iFindAgesAndLens Source code
iFitPlotClrs2 Source code
iFitPlotIVR1 Source code
iFitPlotIVR2 Source code
iFitPlotLtys2 Source code
iFitPlotPchs2 Source code
iFrequency2Indiv Source code
iGetAllDependencies Source code
iGetAllPSD Source code
iGetDecimals Man page Source code
iGetFi Source code
iGetMainTitle Source code
iGetUi Source code
iGetVarFromFormula Man page Source code
iGetVi Source code
iHTestBoot Source code
iHandleAgreeTable Source code
iHistResids Source code
iHndlAddNames Source code
iHndlCols2UseIgnore Man page Source code
iHndlFormula Man page Source code
iHndlMultWhat Man page Source code
iHndlResidType Source code
iIndividual2Indiv Source code
iLHMoran Source code
iLHSchnute Source code
iLegendHelp Man page Source code
iLeslie Source code
iLinesAddLabelsToLines Source code
iListSpecies Man page Source code
iMRCMultiple Source code
iMRCSingle Source code
iMRCSingleVar Source code
iMakeBaseResidPlot Source code
iMakeColor Man page Source code
iMakeDefaultCHLabels Source code
iMakeFilename Source code
iMakeItemsToRemove Source code
iMakeLWPred Source code
iMakeModelHeading Source code
iMakePSDIV Source code
iMakePSDLabels Source code
iMakeVarLabels Source code
iMakeVname Source code
iMark2Indiv Source code
iMarray Source code
iMcNemar Source code
iMethodBBot Source code
iMethodBTop Source code
iMoran Source code
iOddEven Source code
iOutEvent Source code
iOutFrequency Source code
iOutIndividual Source code
iOutMARK Source code
iOutRMark Source code
iPSDCIbinom Source code
iPSDCImultinom Source code
iPSDLitCheck Source code
iPerformControl Source code
iPlotABCamp Source code
iPlotABNum Source code
iPlotExists Man page Source code
iPlotLWPred Source code
iPredictBoot Source code
iPrepCapHistSum Source code
iPrepData4PSD Source code
iProcessSessionInfo Source code
iRMark2Indiv Source code
iRemovalKTX Source code
iRemovalLHCI Source code
iRemovalNCI Source code
iReproInfoLaTeX Source code
iReproInfoMarkdown Source code
iReproInfoR Source code
iResidPlotIVR1 Source code
iResidPlotIVR2 Source code
iRobsonRegier2 Source code
iSGF_GOMP Source code
iSGF_LOGISTIC Source code
iSGF_RICHARDS Source code
iSGF_SCHNUTE Source code
iSGF_VB Source code
iSRS_BH Source code
iSRS_RICKER Source code
iSRS_SHEPHERD Source code
iSRS_SL Source code
iSRStartsBH Source code
iSRStartsI Source code
iSRStartsPlot Source code
iSRStartsR Source code
iSRStartsS Source code
iSRStartsSL Source code
iSameModelClass Source code
iSchnute Source code
iSeber2 Source code
iSeber3 Source code
iSumCH Source code
iSumCHnum Source code
iSumCHnumPetersen Source code
iSumCHnumSchnabel Source code
iSummarizeQ1 Source code
iSummarizeQf Source code
iTypeoflm Man page Source code
iVBStarts.Francis Source code
iVBStarts.GQ Source code
iVBStarts.L0 Source code
iVBStarts.LinfK Source code
iVBStarts.Ls Source code
iVBStarts.Mooij Source code
iVBStarts.Ogle Source code
iVBStarts.Pauly Source code
iVBStarts.Schnute Source code
iVBStarts.Somers Source code
iVBStarts.Somers2 Source code
iVBStarts.Weisberg Source code
iVBStarts.original Source code
iVBStarts.t0 Source code
iVBStarts.typical Source code
iVBStartsPlot Source code
iZippin Source code
iZippinNoVar Source code
iZippinpVar Source code
is.CapHist Man page Source code
is.even Man page Source code
is.odd Man page Source code
is.wholenumber Man page Source code
iwsLitCheck Source code
jolly Man page Source code
kCounts Man page Source code
kPvalue Man page Man page Source code
ksTest Man page Source code
ksTest.default Man page Man page Source code
ksTest.formula Man page Man page Source code
lagratio Man page Source code
lencat Man page Source code
lencat.default Man page Source code
lencat.formula Man page Source code
logbtcf Man page Source code
logisticFuns Man page Source code
lrt Man page Source code
lwCompPreds Man page Source code
mapvalues Man page
metaM Man page Man page Source code
metaM1 Source code
mrClosed Man page Source code
mrOpen Man page Man page Source code
nlsTracePlot Man page Source code
oddeven Man page
onAttach Source code
paletteChoices Man page Source code
pcumsum Man page Source code
perc Man page Source code
plot.CapHist Man page Man page Source code
plot.ageBias Man page Man page Source code
plot.agePrec Man page
plot.bootCase Man page Man page Source code
plot.catchCurve Man page Man page Source code
plot.chapmanRobson Man page Man page Source code
plot.depletion Man page Man page Source code
plot.mrClosed2 Man page Man page Source code
plotAB Man page Source code
plotBinResp Man page Source code
plotBinResp.default Man page Man page Source code
plotBinResp.formula Man page Man page Source code
poiCI Man page Source code
predict.bootCase Man page Man page Source code
predict.nlsBoot Man page Source code
print.compIntercepts Man page Man page Source code
print.compSlopes Man page Man page Source code
print.dunnTest Man page Source code
print.extraTest Man page Source code
print.metaM Man page Man page Source code
psdAdd Man page Source code
psdAdd.default Man page Source code
psdAdd.formula Man page Source code
psdCI Man page Source code
psdCalc Man page Source code
psdPlot Man page Source code
psdVal Man page Source code
purl2 Man page Man page Source code
rcumsum Man page Man page Source code
removal Man page Source code
reproInfo Man page Man page Source code
residPlot Man page Source code
residPlot.IVR Man page Man page Source code
residPlot.ONEWAY Man page Man page Source code
residPlot.POLY Man page Man page Source code
residPlot.SLR Man page Man page Source code
residPlot.TWOWAY Man page Man page Source code
residPlot.lm Man page Man page Source code
residPlot.nlme Man page Source code
residPlot.nls Man page Man page Source code
se Man page Source code
srFunShow Man page Source code
srFuns Man page Source code
srStarts Man page Source code
stockRecruitment Man page
sumTable Man page Source code
sumTable.formula Man page Man page Source code
summary.ageBias Man page Man page Source code
summary.agePrec Man page Man page Source code
summary.catchCurve Man page Man page Source code
summary.chapmanRobson Man page Man page Source code
summary.depletion Man page Man page Source code
summary.mrClosed1 Man page Man page Source code
summary.mrClosed2 Man page Man page Source code
summary.mrOpen Man page Man page Source code
summary.removal Man page Man page Source code
tictactoe Man page Source code
validn Man page Source code
vbFuns Man page Source code
vbStarts Man page Source code
wrAdd Man page Source code
wrAdd.default Man page Source code
wrAdd.formula Man page Source code
wsVal Man page Source code

Files

COPYING
inst
inst/CITATION
inst/extdata
inst/extdata/bootCase1.RData
inst/extdata/PSDWR_testdata.csv
inst/extdata/nlsBoot1.RData
tests
tests/testthat
tests/testthat/test_WSWR_OUT.R
tests/testthat/test_expandCounts_OUT_VALIDATE.R
tests/testthat/test_addZeroCatch_MSG.R
tests/testthat/test_mrOpen_MSG.R
tests/testthat/test_StockRecruit_MSG.R
tests/testthat/Rplots.pdf
tests/testthat/test_FSAUtils_OUT.R
tests/testthat/test_LWCompPreds_MSG.R
tests/testthat/test_addZeroCatch_VALIDATE.R
tests/testthat/test_bcFuns_OUT.R
tests/testthat/test_ciDists_MSG.R
tests/testthat/test_ksTest_OUT.R
tests/testthat/test_extraTests_MSG.R
tests/testthat/test_VonBertalanffy_VALIDATE.R
tests/testthat/EXS_growthUtils.R
tests/testthat/test_growthUtils_MSG.R
tests/testthat/test_comparisonsDVR_OUT.R
tests/testthat/test_expandLenFreq_MSG.R
tests/testthat/test_capHist_OUT.R
tests/testthat/test_metaM_OUT.R
tests/testthat/test_AgeLengthKey_OUT.R
tests/testthat/EXS_mrOpen.R
tests/testthat/test_Summarize_OUT_VALIDATE.R
tests/testthat/test_VonBertalanffy_OUT.R
tests/testthat/EXS_AgeLengthKey.R
tests/testthat/test_extraTests_VALIDATE.R
tests/testthat/EXS_sumTable.R
tests/testthat/test_metaM_MSG.R
tests/testthat/test_metaM_VALIDATE.R
tests/testthat/test_dunnTest_MSG.R
tests/testthat/test_WSWR_VALIDATE.R
tests/testthat/test_histFormula_MSG.R
tests/testthat/test_LWCompPreds_OUT.R
tests/testthat/test_fitResidPlots_OUT.R
tests/testthat/test_CatchCurve_MSG.R
tests/testthat/test_mrOpen_VALIDATE.R
tests/testthat/EXS_Summarize.R
tests/testthat/EXS_growthFuns.R
tests/testthat/test_growthUtils_OUT.R
tests/testthat/test_sumTable_OUT_VALIDATE.R
tests/testthat/test_removal_VALIDATE.R
tests/testthat/test_PSD_VALIDATE.R
tests/testthat/EXS_bootstrap.R
tests/testthat/test_growthFuns_MSG.R
tests/testthat/test_removal_OUT.R
tests/testthat/EXS_lencat.R
tests/testthat/test_dunnTest_VALIDATE.R
tests/testthat/EXS_CatchCurve.R
tests/testthat/test_ksTest_VALIDATE.R
tests/testthat/test_histFromSum_MSG.R
tests/testthat/test_CatchCurve_OUT.R
tests/testthat/EXS_capHist.R
tests/testthat/test_lencat_MSG.R
tests/testthat/test_mrOpen_OUT.R
tests/testthat/test_sumTable_MSG.R
tests/testthat/test_Summarize_MSG.R
tests/testthat/test_AgeLengthKey_MSG.R
tests/testthat/test_depletion_MSG.R
tests/testthat/test_capHist_MSG.R
tests/testthat/test_comparisonsDVR_MSG.R
tests/testthat/test_lencat_VALIDATE.R
tests/testthat/test_Internals.R
tests/testthat/test_ciDists_OUT.R
tests/testthat/test_extraTests_OUT.R
tests/testthat/test_histFormula_OUT.R
tests/testthat/test_mrClosed_VALIDATE.R
tests/testthat/test_fitResidPlots_MSG.R
tests/testthat/test_FSAUtils_MSG.R
tests/testthat/EXS_extraTests.R
tests/testthat/EXS_dunnTest.R
tests/testthat/test_capHist_VALIDATE.R
tests/testthat/test_nlsTracePlot_MSG.R
tests/testthat/test_nlsTracePlot_OUT.R
tests/testthat/test_lencat_OUT.R
tests/testthat/EXS_comparisonsDVR.R
tests/testthat/test_AgeComparisons_OUT.R
tests/testthat/test_ciDists_VALIDATE.R
tests/testthat/test_knitUtil_OUT.R
tests/testthat/test_expandLenFreq_OUT_VALIDATE.R
tests/testthat/test_depletion_OUT.R
tests/testthat/test_removal_MSG.R
tests/testthat/EXS_PSD.R
tests/testthat/test_AgeComparisons_VALIDATE.R
tests/testthat/test_PSD_MSG.R
tests/testthat/test_addZeroCatch_OUT.R
tests/testthat/EXS_addZeroCatch.R
tests/testthat/test_ksTest_MSG.R
tests/testthat/test_dunnTest_OUT.R
tests/testthat/test_growthFuns_OUT.R
tests/testthat/test_depletion_VALIDATE.R
tests/testthat/test_AgeLengthKey_VALIDATE.R
tests/testthat/test_StockRecruit_OUT.R
tests/testthat/test_mrClosed_OUT.R
tests/testthat/test_WSWR_MSG.R
tests/testthat/test_AgeComparisons_MSG.R
tests/testthat/test_expandCounts_MSG.R
tests/testthat/test_bcFuns_MSG.R
tests/testthat/test_mrClosed_MSG.R
tests/testthat/test_bootstrap_MSG.R
tests/testthat/test_PSD_OUT.R
tests/testthat/EXS_fitResidPlots.R
tests/testthat/test_bootstrap_OUT.R
tests/testthat/test_VonBertalanffy_MSG.R
tests/testthat/test_CatchCurve_VALIDATE.R
tests/test-all.R
NAMESPACE
NEWS.md
data
data/CodNorwegian.rdata
data/PikeNYPartial1.rdata
data/SMBassWB.rdata
data/CutthroatAL.rdata
data/ChinookArg.rdata
data/SMBassLS.rdata
data/WSlit.rdata
data/PSDlit.rdata
data/BrookTroutTH.rdata
data/Mirex.rdata
data/Ecoli.rdata
data/WhitefishLC.rdata
data/SpotVA1.rdata
data/WR79.rdata
data/BluegillJL.rdata
data/PikeNY.rdata
R
R/plotBinResp.R
R/residPlot.R
R/expandCounts.R
R/nlsTracePlot.R
R/capHistConvert.R
R/alkIndivAge.R
R/bootstrap.R
R/SpotVA1.R
R/depletion.R
R/stockRecruitment.R
R/alkPlot.R
R/mrClosed.R
R/WR79.R
R/Summarize.R
R/bcFuns.R
R/WhitefishLC.R
R/BluegillJL.R
R/growthModels.R
R/hist.formula.R
R/growthDataUtils.R
R/alkSummaries.R
R/expandLenFreq.R
R/PikeNY.R
R/FSA.R
R/vbStarts.R
R/Mirex.R
R/mrOpen.R
R/lencat.R
R/ageComparisons.R
R/comparisonsDVR.R
R/extraTests.R
R/fitPlot.R
R/removal.R
R/wsVal.R
R/lwCompPreds.R
R/tictactoe.R
R/CIDists.R
R/knitUtil.R
R/BrookTroutTH.R
R/WSlit.R
R/wrAdd.R
R/chapmanRobson.R
R/FSA-internals.R
R/srStarts.R
R/SMBassLS.R
R/catchCurve.R
R/SMBassWB.R
R/FSAUtils.R
R/ksTest.R
R/sumTable.R
R/histFromSum.R
R/dunnTest.R
R/PikeNYPartial1.R
R/Ecoli.R
R/mapvalues.R
R/capHistSum.R
R/PSDlit.R
R/psdVal.R
R/psdPlot.R
R/ChinookArg.R
R/CodNorwegian.R
R/psdCI.R
R/CutthroatAL.R
R/metaM.R
R/psdAdd.R
R/psdCalc.R
R/addZeroCatch.R
MD5
DESCRIPTION
man
man/PikeNY.Rd
man/col2rgbt.Rd
man/Summarize.Rd
man/logbtcf.Rd
man/alkMeanVar.Rd
man/poiCI.Rd
man/compSlopes.Rd
man/growthModels.Rd
man/geomean.Rd
man/histFromSum.Rd
man/binCI.Rd
man/lencat.Rd
man/WR79.Rd
man/alkPlot.Rd
man/psdAdd.Rd
man/psdPlot.Rd
man/FSAUtils.Rd
man/perc.Rd
man/chooseColors.Rd
man/CutthroatAL.Rd
man/vbStarts.Rd
man/hyperCI.Rd
man/ChinookArg.Rd
man/fishR.Rd
man/mrOpen.Rd
man/plotBinResp.Rd
man/rcumsum.Rd
man/dunnTest.Rd
man/chapmanRobson.Rd
man/FSA-internals.Rd
man/diags.Rd
man/validn.Rd
man/SMBassWB.Rd
man/capHistConvert.Rd
man/nlsTracePlot.Rd
man/expandCounts.Rd
man/FSA.Rd
man/BluegillJL.Rd
man/mrClosed.Rd
man/ksTest.Rd
man/lagratio.Rd
man/addRadCap.Rd
man/se.Rd
man/mapvalues.Rd
man/depletion.Rd
man/hoCoef.Rd
man/psdCalc.Rd
man/catchCurve.Rd
man/PSDlit.Rd
man/PikeNYPartial1.Rd
man/WhitefishLC.Rd
man/headtail.Rd
man/extraTests.Rd
man/bootCase.Rd
man/capHistSum.Rd
man/gConvert.Rd
man/Subset.Rd
man/wrAdd.Rd
man/removal.Rd
man/Schnute.Rd
man/knitUtil.Rd
man/alkAgeDist.Rd
man/nlsBoot.Rd
man/srStarts.Rd
man/compIntercepts.Rd
man/WSlit.Rd
man/agePrecision.Rd
man/CodNorwegian.Rd
man/Ecoli.Rd
man/bcFuns.Rd
man/oddeven.Rd
man/fact2num.Rd
man/residPlot.Rd
man/tictactoe.Rd
man/Mirex.Rd
man/addZeroCatch.Rd
man/SpotVA1.Rd
man/hist.formula.Rd
man/fsaNews.Rd
man/psdCI.Rd
man/expandLenFreq.Rd
man/sumTable.Rd
man/alkIndivAge.Rd
man/psdVal.Rd
man/fitPlot.Rd
man/ageBias.Rd
man/lwCompPreds.Rd
man/BrookTroutTH.Rd
man/wsVal.Rd
man/SMBassLS.Rd
man/metaM.Rd
man/stockRecruitment.Rd
FSA documentation built on May 29, 2017, 3:26 p.m.