Man pages for FateID
Quantification of Fate Bias in Multipotent Progenitors
| compdr | Computation of dimensional reduction representations |
| diffexpnb | Function for differential expression analysis |
| fateBias | Computation of fate bias |
| filterset | Function for filtering expression data |
| gene2gene | Comparative plot of the expression levels of two genes |
| getFeat | Feature selection based on differentially expressed genes |
| getPart | Inference of a cell type partition |
| getsom | Topological ordering of pseudo-temporal expression profiles |
| impGenes | Extract genes with high importance values for random forest... |
| intestine | Single-cell transcriptome data of intestinal epithelial cells |
| plotdiffgenesnb | Function for plotting differentially expressed genes |
| plotexpression | Plotting of pseudo-temporal expression profiles |
| plotexpressionProfile | Plotting smoothed pseudo-temporal expression profiles for... |
| plotFateMap | Plot dimensional reduction representation of the expression... |
| plotheatmap | Heatmap of expression profiles |
| prcurve | Computation of a principal curve for a given dimensional... |
| procsom | Processing of self-organizing maps for pseudo-temporal... |
| reclassify | Reclassification of cells |
