Nothing
test_that("Function returns correct values", {
# starting values
testMatrix1 <- matrix(data=c(0.1199240, 0.188146026, 0.31481645, 0.454346750,
-0.4088952, -0.009244923, 0.44777067, 1.001830760,
0.4277991, 0.603188626 , 1.92344212 , 2.062777662,
-2.2328662 ,-2.042898771 , 0.35867035 , 0.907465245,
-2.5630808 ,-2.064273777, -1.23140885, -0.927024725,
0.2323925, 0.341050237, 0.89701427, 1.084108858,
-0.9907339 ,-0.617642400, -0.06840412, 0.117407837,
-0.4229014, 0.007461673 , 0.41849777, 0.937398067,
-1.3006321 ,-1.275517766, -0.46704551, -0.436057542,
-3.6169809 ,-3.278239026, -1.14842928 ,-0.917869269,
-0.5573558 ,-0.515324252 ,-0.42162779 ,-0.303922994,
-1.6530331 ,-1.113884835, -0.22295531 ,-0.142508395,
-1.7779261 ,-1.698957584, 0.58819769 , 0.609471724,
-1.6492244 ,-1.310178700, -0.08413849 , 0.008898696,
-0.4535884 ,-0.375611086, 1.18356358 , 1.753746539,
-0.8892359 ,-0.816145242, -0.47619296 ,-0.029626635,
1.5656538 , 2.115238384, 3.00592957, 3.082389607,
0.9068369 , 1.160665144 , 1.54206699 , 1.736698607,
-0.8969491, -0.608124123 ,-0.30055712, 0.287914788,
-1.6964713 ,-1.350383708, -0.07207102 , 0.289067511),
ncol = 4, byrow = TRUE)
testMatrix2 <- matrix(data=c(0.1199240, 0.188146026, 0.31481645,
-0.4088952, -0.009244923, 0.44777067,
0.4277991, 0.603188626 , 1.92344212 ,
-2.2328662 ,-2.042898771 , 0.35867035 ,
-2.5630808 ,-2.064273777, -1.23140885,
0.2323925, 0.341050237, 0.89701427,
-0.9907339 ,-0.617642400, -0.06840412,
-0.4229014, 0.007461673 , 0.41849777,
-1.3006321 ,-1.275517766, -0.46704551,
-3.6169809 ,-3.278239026, -1.14842928 ,
-0.5573558 ,-0.515324252 ,-0.42162779 ,
-1.6530331 ,-1.113884835, -0.22295531 ,
-1.7779261 ,-1.698957584, 0.58819769 ,
-1.6492244 ,-1.310178700, -0.08413849 ,
-0.4535884 ,-0.375611086, 1.18356358 ,
-0.8892359 ,-0.816145242, -0.47619296 ,
1.5656538 , 2.115238384, 3.00592957,
0.9068369 , 1.160665144 , 1.54206699 ,
-0.8969491, -0.608124123 ,-0.30055712,
-1.6964713 ,-1.350383708, -0.07207102 ),
ncol = 3, byrow = TRUE)
testMatrix1Res <- matrix(data=c(0.11992398 , 0.188146026 , 0.31481645 , 0.454346750,
-0.40889518 ,0.321100250 , 0.44777067 , 1.001830760,
0.42779912 , 0.603188626 , 1.92344212 , 2.062777662,
-2.23286624 ,-2.042898771 , 0.35867035 , 0.907465245,
-2.56308081 ,-2.064273777 ,-1.23140885, -0.927024725,
0.23239251 , 0.486220708 , 0.61289113 , 1.084108858,
-0.99073392 ,-0.617642400 ,-0.06840412 , 0.008055915,
-0.06076037, 0.007461673 , 0.41849777 , 0.937398067,
-1.30063213 ,-1.275517766 ,-0.46704551 ,-0.386598596,
-3.61698093, -3.278239026 ,-1.14842928, -0.917869269,
-0.55735575, -0.548298205 ,-0.42162779 ,-0.303922994,
-1.65303313, -1.113884835, -0.22295531, -0.142508395,
-2.03769949, -1.698957584 , 0.58819769, 0.609471724,
-1.64892060, -1.310178700 ,-0.03186601 , 0.008898696,
-0.45358837, -0.375611086, 0.51508010 , 1.753746539,
-0.88923590 ,-0.602863385, -0.47619296 ,-0.029626635,
1.57609009, 2.115238384 , 3.00592957 , 3.082389607,
0.90683695 , 1.160665144 , 1.54206699 , 1.736698607,
-0.89694909, -0.608124123 , 0.20034813 , 0.318052920,
-1.69647135, -1.350383708, -0.07207102 , 0.045633775),
ncol = 4, byrow = TRUE)
testMatrix2Res <- matrix(data=c(0.11992398 , 0.188146026 , 0.31481645 ,
-0.40889518 ,0.321100250 , 0.44777067 ,
0.42779912 , 0.603188626 , 1.92344212 ,
-2.23286624 ,-2.042898771 , 0.35867035 ,
-2.56308081 ,-2.064273777 ,-1.23140885,
0.23239251 , 0.486220708 , 0.61289113 ,
-0.99073392 ,-0.617642400 ,-0.06840412 ,
-0.06076037, 0.007461673 , 0.41849777 ,
-1.30063213 ,-1.275517766 ,-0.46704551 ,
-3.61698093, -3.278239026 ,-1.14842928,
-0.55735575, -0.548298205 ,-0.42162779 ,
-1.65303313, -1.113884835, -0.22295531,
-2.03769949, -1.698957584 , 0.58819769,
-1.64892060, -1.310178700 ,-0.03186601 ,
-0.45358837, -0.375611086, 0.51508010 ,
-0.88923590 ,-0.602863385, -0.47619296 ,
1.57609009, 2.115238384 , 3.00592957 ,
0.90683695 , 1.160665144 , 1.54206699 ,
-0.89694909, -0.608124123 , 0.20034813 ,
-1.69647135, -1.350383708, -0.07207102 ),
ncol = 3, byrow = TRUE)
testMatrix1Mask <- matrix(data=c(FALSE ,FALSE, FALSE ,FALSE,
FALSE , TRUE ,FALSE ,FALSE,
FALSE ,FALSE, FALSE ,FALSE,
FALSE, FALSE, FALSE, FALSE,
FALSE, FALSE, FALSE, FALSE,
FALSE , TRUE , TRUE, FALSE,
FALSE, FALSE, FALSE , TRUE,
TRUE, FALSE, FALSE ,FALSE,
FALSE ,FALSE ,FALSE , TRUE,
FALSE, FALSE, FALSE ,FALSE,
FALSE , TRUE ,FALSE ,FALSE,
FALSE ,FALSE, FALSE, FALSE,
TRUE, FALSE, FALSE, FALSE,
TRUE, FALSE , TRUE, FALSE,
FALSE ,FALSE , TRUE, FALSE,
FALSE , TRUE, FALSE, FALSE,
TRUE, FALSE, FALSE, FALSE,
FALSE, FALSE, FALSE ,FALSE,
FALSE, FALSE , TRUE , TRUE,
FALSE, FALSE ,FALSE , TRUE),
ncol = 4, byrow = TRUE)
testMatrix2Mask <- matrix(data=c(FALSE ,FALSE, FALSE ,
FALSE , TRUE ,FALSE ,
FALSE ,FALSE, FALSE ,
FALSE, FALSE, FALSE,
FALSE, FALSE, FALSE,
FALSE , TRUE , TRUE,
FALSE, FALSE, FALSE ,
TRUE, FALSE, FALSE ,
FALSE ,FALSE ,FALSE ,
FALSE, FALSE, FALSE ,
FALSE , TRUE ,FALSE ,
FALSE ,FALSE, FALSE,
TRUE, FALSE, FALSE,
TRUE, FALSE , TRUE,
FALSE ,FALSE , TRUE,
FALSE , TRUE, FALSE,
TRUE, FALSE, FALSE,
FALSE, FALSE, FALSE ,
FALSE, FALSE , TRUE ,
FALSE, FALSE ,FALSE ),
ncol = 3, byrow = TRUE)
# snapshots tests
expect_snapshot(
{
ErrorMatrix(trueData=testMatrix1,imputedData=testMatrix1Res,imputedMask=testMatrix1Mask)
}
)
expect_snapshot(
{
ErrorMatrix(trueData=testMatrix2,imputedData=testMatrix2Res,imputedMask=testMatrix2Mask)
}
)
})
test_that("Function reports errors", {
# starting values
set.seed(123456)
testMatrix1 <- matrix(c(1,2,3,4,
-1,3,5,9,
0,4,7,1,
-1,-3,5,0,
7,11,22,15),nrow = 5,ncol = 4,byrow = TRUE)
testMatrixBad <- matrix(c(1,2,3,"c",
-1,3,5,9,
0,4,7,1,
-1,-3,5,0,
7,11,22,15),nrow = 5,ncol = 4,byrow = TRUE)
testMatrixBadC <- matrix(c(1,2,3,4,
-1,3,5,9,
0,4,7,1,
-1,-3,5,0,
7,11,22,15,
10,12,14,16),nrow = 6,ncol = 4,byrow = TRUE)
testMatrix2 <- matrix(c(1,2,3,
-1,3,5,
0,4,7,
-1,-3,5,
7,11,22),nrow = 5,ncol = 3,byrow = TRUE)
testMatrix1Mask <- matrix(c(TRUE,TRUE,TRUE,FALSE,
TRUE,TRUE,TRUE,TRUE,
TRUE,FALSE,TRUE,FALSE,
TRUE,TRUE,TRUE,FALSE,
TRUE,TRUE,TRUE,FALSE),nrow = 5,ncol = 4,byrow = TRUE)
# tests
expect_error(ErrorMatrix(trueData=0.53,imputedData=testMatrix1,imputedMask=testMatrix1Mask),
"Parameter trueData should be a data frame or a matrix or a list!")
expect_error(ErrorMatrix(trueData=testMatrixBad,imputedData=testMatrix1,imputedMask=testMatrix1Mask),
"Parameter trueData should have numerical values!")
expect_error(ErrorMatrix(trueData=testMatrix1,imputedData=testMatrix1,imputedMask=testMatrixBad),
"Parameter imputedMask should have logical values!")
expect_error(ErrorMatrix(trueData=testMatrix1,imputedData=testMatrix2,imputedMask=testMatrix1Mask),
"The parameters trueData, imputedData, imputedMask should have the same number of columns!")
expect_error(ErrorMatrix(trueData=testMatrix1,imputedData=testMatrixBadC,imputedMask=testMatrix1Mask),
"The parameters trueData, imputedData, imputedMask should have the same number of rows!")
})
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