ebb_loglik: ebb_loglik.R
In GBJ: Generalized Berk-Jones Test for Set-Based Inference in Genetic Association Studies
ebb_loglik R Documentation
ebb_loglik.R
Description
An internal function only (doesn't do error checking or take care of boundary cases).
The log-likelihood (log-PMF) calculation for the Extended Beta-Binomial proposed by Prentice (1986).
Takes in a vectorized argument because we apply() it in run_BB_GBJ().
Usage
ebb_loglik(x, d)
Arguments
x
A vector of length 3 with (1) value of outcome (2) mu parameter (3) gamma parameter
d
The number of test stsatistics in the set
Value
log( Pr(V=x[1]) ) where V~EBB(mu,gamma; d)
Examples
ebb_loglik(x=c(1, 0.5, 0.1), d=10)
GBJ documentation built on May 29, 2024, 1:33 a.m.
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| ebb_loglik | R Documentation |
ebb_loglik.R
Description
An internal function only (doesn't do error checking or take care of boundary cases). The log-likelihood (log-PMF) calculation for the Extended Beta-Binomial proposed by Prentice (1986). Takes in a vectorized argument because we apply() it in run_BB_GBJ().
Usage
ebb_loglik(x, d)
Arguments
x |
A vector of length 3 with (1) value of outcome (2) mu parameter (3) gamma parameter |
d |
The number of test stsatistics in the set |
Value
log( Pr(V=x[1]) ) where V~EBB(mu,gamma; d)
Examples
ebb_loglik(x=c(1, 0.5, 0.1), d=10)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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