parse_input: parse_input.R

In GBJ: Generalized Berk-Jones Test for Set-Based Inference in Genetic Association Studies

parse_input.R

Description

Internal function to accept the input as unsorted Z-statistics and either a matrix or vector of correlations, and return the t_vec and pairwise_cors. Also do limited error checking.

Usage

parse_input(test_stats, cor_mat = NULL, pairwise_cors = NULL)

Arguments

test_stats	All test statistics in the set
cor_mat	The correlation matrix of the test statistics
pairwise_cors	The vector of all pairwise correlations

Value

A list with the elements:

t_vec	The sorted magnitudes of test statistics
pairwise_cors	The vector of all pairwise correlations

Examples

parse_input(test_stats=rnorm(5), pairwise_cors=rep(0.3,10))

GBJ documentation built on May 29, 2024, 1:33 a.m.