GEEaSPU: Adaptive Association Tests for Multiple Phenotypes using Generalized Estimating Equations (GEE)
Version 1.0.2

Provides adaptive association tests for SNP level, gene level and pathway level analyses.

Browse man pages Browse package API and functions Browse package files

AuthorJunghi Kim and Wei Pan
Date of publication2016-08-04 11:47:48
MaintainerJunghi Kim <junghikim0@gmail.com>
LicenseGNU General Public License (>= 3)
Version1.0.2
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("GEEaSPU")

Man pages

GEEaSPU: An adaptive sum of powered score (SPU) test for single SNP...
GEEaSPU-package: Adaptive Association Tests for Multiple Phenotypes using...
GEEaSPUpath: An adaptive sum of powered score (SPU) test for gene-set...
GEEaSPUset: An adaptive sum of powered score (SPU) test for SNP-set...

Functions

GEEaSPU Man page Source code
GEEaSPU-package Man page
GEEaSPUpath Man page Source code
GEEaSPUset Man page Source code
InfU Source code
a8 Source code
bin_score Source code
bin_score_cov Source code
count_if Source code
gauss_score Source code
gauss_score_cov Source code
getEigen Source code
gin Source code
hB Source code
longForm Source code
pathB Source code
pathval Source code
perm Source code
perm_score Source code
permhigh Source code
permhigh_score Source code
permpath Source code
rankC Source code
rcpp_spuval Source code
rcpp_standPow Source code
rowMinsC Source code
sB Source code
signC Source code
sim Source code
sim_score Source code
simhigh Source code
simhigh_score Source code
which_min Source code

Files

src
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/GEEaSPU.cpp
NAMESPACE
R
R/GEEaSPU.R
R/RcppExports.R
MD5
DESCRIPTION
man
man/GEEaSPUset.Rd
man/GEEaSPU.Rd
man/GEEaSPUpath.Rd
man/GEEaSPU-package.Rd
GEEaSPU documentation built on May 29, 2017, 3:43 p.m.