GGally: Extension to 'ggplot2'

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The R package 'ggplot2' is a plotting system based on the grammar of graphics. 'GGally' extends 'ggplot2' by adding several functions to reduce the complexity of combining geometric objects with transformed data. Some of these functions include a pairwise plot matrix, a two group pairwise plot matrix, a parallel coordinates plot, a survival plot, and several functions to plot networks.

Author
Barret Schloerke [aut, cre] (author for ggpairs, ggduo, ggnostic, ggts, ggfacet, and ggally_*. Contributor for all functions.), Jason Crowley [aut] (ggparcoord), Di Cook [aut, ths] (ggscatmat, gglyph), Heike Hofmann [ths], Hadley Wickham [ths], Francois Briatte [aut] (ggcorr, ggnet, ggnet2), Moritz Marbach [aut] (ggnet, ggnet2), Edwin Thoen [aut] (ggsurv), Amos Elberg [aut] (ggnetworkmap), Joseph Larmarange [aut] (ggcoef)
Date of publication
2016-11-13 10:14:15
Maintainer
Barret Schloerke <schloerke@gmail.com>
License
GPL (>= 2.0)
Version
1.3.0
URLs

View on CRAN

Man pages

add_and_overwrite_aes
Add new aes
add_ref_boxes
Add reference boxes around each cell of the glyphmap.
add_ref_lines
Add reference lines for each cell of the glyphmap.
australia_PISA2012
Programme for International Student Assesment (PISA) 2012...
brew_colors
RColorBrewer Set1 colors
broomify
Broomify a model
column_is_character
Get vector of variable types from data frame
find_plot_type
Find Plot Types
flea
Historical data used for classification examples.
fn_switch
Function switch
getPlot
getPlot
get_x_axis_labels
Get x axis labels
gg-add
Modify a ggmatrix object by adding an ggplot2 object to all...
ggally_barDiag
Plots the Bar Plots by Using Diagonal
ggally_blank
Blank
ggally_box
Plots the Box Plot
ggally_cor
Correlation from the Scatter Plot
ggally_density
Plots the Scatter Density Plot
ggally_densityDiag
Plots the Density Plots by Using Diagonal
ggally_denstrip
Plots a tile plot with facets
ggally_diagAxis
Internal Axis Labeling Plot for ggpairs
ggally_dot
Plots the Box Plot with Dot
ggally_dot_and_box
Plots either Box Plot or Dot Plots
ggally_facetbar
Plots the Bar Plots Faceted by Conditional Variable
ggally_facetdensity
Plots the density plots by faceting
ggally_facetdensitystrip
Plots a density plot with facets or a tile plot with facets
ggally_facethist
Plots the Histograms by Faceting
ggally_na
NA plot
ggally_nostic_cooksd
ggnostic - Cook's distance
ggally_nostic_hat
ggnostic - leverage points
ggally_nostic_line
ggnostic -background line with geom
ggally_nostic_resid
ggnostic - residuals
ggally_nostic_se_fit
ggnostic - fitted value standard error
ggally_nostic_sigma
ggnostic - leave one out model sigma
ggally_nostic_std_resid
ggnostic - standardized residuals
ggally_points
Plots the Scatter Plot
ggally_ratio
Plots a mosaic plot
ggally_smooth
Plots the Scatter Plot with Smoothing
ggally_text
GGplot Text
ggcoef
ggcoef - Plot Model Coefficients with broom and ggplot2
ggcorr
ggcorr - Plot a correlation matrix with ggplot2
ggduo
ggduo - A ggplot2 generalized pairs plot for two columns sets...
ggfacet
ggfacet - single ggplot2 plot matrix with facet_grid
gglegend
Plot only legend of plot function
ggmatrix
ggmatrix - A ggplot2 Matrix
ggmatrix_gtable
Print ggpair object
ggnet
ggnet - Plot a network with ggplot2
ggnet2
ggnet2 - Plot a network with ggplot2
ggnetworkmap
ggnetworkmap - Plot a network with ggplot2 suitable for...
ggnostic
ggnostic - Plot matrix of statistical model diagnostics
ggpairs
ggpairs - A ggplot2 generalized pairs plot
ggparcoord
ggparcoord - A ggplot2 Parallel Coordinate Plot
ggscatmat
ggscatmat - a traditional scatterplot matrix for purely...
ggsurv
Survival curves with ggplot2
ggts
Multiple Time Series
glyphplot
Glyph plot class
glyphs
Create the data needed to generate a glyph plot.
grab_legend
Grab the legend and print it as a plot
happy
Data related to happiness from the General Social Survey,...
is_blank_plot
Is Blank Plot? Find out if the plot equals a blank plot
is_date
Check if object is a date
lowertriangle
lowertriangle - rearrange dataset as the preparation of...
mapping_color_to_fill
Aesthetic Mapping Color Fill
model_terms
Model term names
nasa
Data from the Data Expo JSM 2006.
pigs
United Kingdom Pig Production
plotting_data_type
Get plotting data type
plot_types
Plot Types
print.ggmatrix
Print ggpair object
print_if_interactive
Print if not CRAN
putPlot
Put Plot
require_pkgs
Require packages
rescale01
Rescaling functions
scag_order
Find order of variables
scatmat
scatmat - plot the lowertriangle plots and density plots of...
singleClassOrder
Order axis variables
skewness
Sample skewness
str.ggmatrix
ggmatrix structure
twitter_spambots
Twitter spambots
uppertriangle
uppertriangle - rearrange dataset as the preparation of...
wrap
Wrap a function with different parameter values

Files in this package

GGally
GGally/inst
GGally/inst/doc
GGally/inst/doc/ggscatmat.html
GGally/inst/doc/rd.html
GGally/inst/doc/ggmatrix.html
GGally/inst/doc/rd.Rmd
GGally/inst/doc/docs.Rmd
GGally/inst/doc/docs.html
GGally/inst/doc/ggcoef.html
GGally/inst/doc/gglyph.html
GGally/inst/doc/ggduo.html
GGally/inst/doc/ggsurv.html
GGally/inst/doc/ggpairs.html
GGally/inst/doc/ggnetworkmap.html
GGally/tests
GGally/tests/testthat.R
GGally/tests/testthat
GGally/tests/testthat/test-utils.R
GGally/tests/testthat/test-ggcorr.R
GGally/tests/testthat/test-wrap.R
GGally/tests/testthat/test-gg-plots.R
GGally/tests/testthat/test-ggsurv.R
GGally/tests/testthat/test-ggnetworkmap.R
GGally/tests/testthat/test-crosstalk.R
GGally/tests/testthat/test-ggparcoord.R
GGally/tests/testthat/test-ggnet2.R
GGally/tests/testthat/test-ggmatrix_add.R
GGally/tests/testthat/test-gglegend.R
GGally/tests/testthat/test-ggscatmat.R
GGally/tests/testthat/test-ggnostic.R
GGally/tests/testthat/test-ggfacet.R
GGally/tests/testthat/test-ggcoef.R
GGally/tests/testthat/test-ggsave.R
GGally/tests/testthat/test-ggnet.R
GGally/tests/testthat/test-gglyph.R
GGally/tests/testthat/test-zzz_ggpairs.R
GGally/tests/testthat/test-ggmatrix_getput.R
GGally/tests/testthat/test-ggmatrix.R
GGally/NAMESPACE
GGally/NEWS.md
GGally/data
GGally/data/pigs.rda
GGally/data/happy.rda
GGally/data/twitter_spambots.rda
GGally/data/australia_PISA2012.rda
GGally/data/flea.rda
GGally/data/nasa.rda
GGally/R
GGally/R/ggnostic.R
GGally/R/ggpairs.R
GGally/R/ggpairs_internal_plots.R
GGally/R/utils.R
GGally/R/gg-plots.R
GGally/R/ggmatrix_make_plot.R
GGally/R/ggsurv.R
GGally/R/ggmatrix.R
GGally/R/ggmatrix_print.R
GGally/R/ggcorr.R
GGally/R/ggnetworkmap.R
GGally/R/ggsave.R
GGally/R/gglyph.R
GGally/R/data-flea.R
GGally/R/data-twitter_spambots.R
GGally/R/ggmatrix_legend.R
GGally/R/data-nasa.R
GGally/R/data-pigs.R
GGally/R/ggparcoord.R
GGally/R/data-happy.R
GGally/R/ggpairs_add.R
GGally/R/ggnet2.R
GGally/R/data-australia-pisa-2012.R
GGally/R/ggcoef.R
GGally/R/find-combo.R
GGally/R/ggmatrix_gtable_helpers.R
GGally/R/ggnet.R
GGally/R/ggmatrix_gtable.R
GGally/R/ggpairs_getput.R
GGally/R/ggscatmat.R
GGally/R/ggfacet.R
GGally/vignettes
GGally/vignettes/rd_index.yaml
GGally/vignettes/ggscatmat.html
GGally/vignettes/ggmatrix.html
GGally/vignettes/.install_extras
GGally/vignettes/glyph.html
GGally/vignettes/rd.Rmd
GGally/vignettes/docs.Rmd
GGally/vignettes/ggcoef.html
GGally/vignettes/gglyph.html
GGally/vignettes/ggduo.html
GGally/vignettes/ggsurv.html
GGally/vignettes/ggpairs.html
GGally/vignettes/ggnetworkmap.html
GGally/README.md
GGally/MD5
GGally/build
GGally/build/vignette.rds
GGally/DESCRIPTION
GGally/man
GGally/man/add_ref_lines.Rd
GGally/man/happy.Rd
GGally/man/str.ggmatrix.Rd
GGally/man/lowertriangle.Rd
GGally/man/print.ggmatrix.Rd
GGally/man/ggnet.Rd
GGally/man/ggally_denstrip.Rd
GGally/man/ggally_density.Rd
GGally/man/model_terms.Rd
GGally/man/brew_colors.Rd
GGally/man/gg-add.Rd
GGally/man/ggally_nostic_se_fit.Rd
GGally/man/ggally_nostic_line.Rd
GGally/man/ggally_facetbar.Rd
GGally/man/fn_switch.Rd
GGally/man/ggally_dot_and_box.Rd
GGally/man/ggally_nostic_cooksd.Rd
GGally/man/print_if_interactive.Rd
GGally/man/glyphplot.Rd
GGally/man/skewness.Rd
GGally/man/scatmat.Rd
GGally/man/ggally_points.Rd
GGally/man/ggally_nostic_std_resid.Rd
GGally/man/ggally_nostic_sigma.Rd
GGally/man/ggally_barDiag.Rd
GGally/man/ggally_facethist.Rd
GGally/man/find_plot_type.Rd
GGally/man/ggscatmat.Rd
GGally/man/australia_PISA2012.Rd
GGally/man/ggnetworkmap.Rd
GGally/man/ggcoef.Rd
GGally/man/pigs.Rd
GGally/man/plot_types.Rd
GGally/man/nasa.Rd
GGally/man/ggpairs.Rd
GGally/man/add_and_overwrite_aes.Rd
GGally/man/uppertriangle.Rd
GGally/man/ggally_smooth.Rd
GGally/man/add_ref_boxes.Rd
GGally/man/is_date.Rd
GGally/man/twitter_spambots.Rd
GGally/man/ggmatrix.Rd
GGally/man/glyphs.Rd
GGally/man/ggally_cor.Rd
GGally/man/ggally_nostic_resid.Rd
GGally/man/plotting_data_type.Rd
GGally/man/ggmatrix_gtable.Rd
GGally/man/ggally_ratio.Rd
GGally/man/singleClassOrder.Rd
GGally/man/ggnostic.Rd
GGally/man/ggcorr.Rd
GGally/man/gglegend.Rd
GGally/man/getPlot.Rd
GGally/man/rescale01.Rd
GGally/man/require_pkgs.Rd
GGally/man/putPlot.Rd
GGally/man/ggts.Rd
GGally/man/ggally_na.Rd
GGally/man/get_x_axis_labels.Rd
GGally/man/ggally_blank.Rd
GGally/man/ggally_facetdensity.Rd
GGally/man/wrap.Rd
GGally/man/ggparcoord.Rd
GGally/man/ggnet2.Rd
GGally/man/ggally_densityDiag.Rd
GGally/man/ggally_dot.Rd
GGally/man/scag_order.Rd
GGally/man/broomify.Rd
GGally/man/ggally_nostic_hat.Rd
GGally/man/ggsurv.Rd
GGally/man/ggally_diagAxis.Rd
GGally/man/column_is_character.Rd
GGally/man/ggally_facetdensitystrip.Rd
GGally/man/ggally_box.Rd
GGally/man/grab_legend.Rd
GGally/man/ggduo.Rd
GGally/man/flea.Rd
GGally/man/ggfacet.Rd
GGally/man/mapping_color_to_fill.Rd
GGally/man/is_blank_plot.Rd
GGally/man/ggally_text.Rd