GMCM: Fast Estimation of Gaussian Mixture Copula Models

Unsupervised Clustering and Meta-analysis using Gaussian Mixture Copula Models.

Install the latest version of this package by entering the following in R:
install.packages("GMCM")
AuthorAnders Ellern Bilgrau, Martin Boegsted, Poul Svante Eriksen
Date of publication2017-01-13 06:42:20
MaintainerAnders Ellern Bilgrau <anders.ellern.bilgrau@gmail.com>
LicenseGPL (>= 2)
Version1.2.4
https://github.com/AEBilgrau/GMCM

View on CRAN

Functions

choose.theta Man page
colSds Man page
cummean Man page
dgmcm.loglik Man page
dgmm.loglik Man page
dgmm.loglik.marginal Man page
dmvnormal Man page
EMAlgorithm Man page
EStep Man page
fit.full.gmcm Man page
fit.full.GMCM Man page
fit.meta.gmcm Man page
fit.meta.GMCM Man page
freshVsFrozen Man page
full2meta Man page
get.idr Man page
get.IDR Man page
get.prob Man page
GMCM Man page
GMCM-package Man page
inv.logit Man page
inv.rho.transform Man page
inv.tt Man page
is.theta Man page
logit Man page
meta2full Man page
MStep Man page
pgmm.marginal Man page
PseudoEMAlgorithm Man page
qgmm.marginal Man page
rho.transform Man page
rmvnormal Man page
rowSds Man page
rtheta Man page
SimulateGMCMData Man page
SimulateGMMData Man page
tt Man page
u133VsExon Man page
Uhat Man page

Files

inst
inst/CITATION
inst/NEWS.Rd
inst/doc
inst/doc/GMCM-JStatSoft.pdf
inst/doc/GMCM-JStatSoft.R
inst/doc/GMCM-JStatSoft.Rnw
tests
tests/testthat
tests/testthat/test-pgmm.marginal.R tests/testthat/test-EMAlgorithm.R tests/testthat/test-tt-inv.tt.R tests/testthat/test-full2meta-meta2full.R tests/testthat/test-meta.gmcm.loglik.R tests/testthat/test-cummean.R tests/testthat/test-qgmm.marginal.R tests/testthat/test-dgmm.loglik.R tests/testthat/test-EStep.R tests/testthat/test-dgmm.loglik.marginal.R tests/testthat/test-choose.theta.R tests/testthat/test-logit-inv.logit.R tests/testthat/test-get.idr-get.prob-get.IDR2.R tests/testthat/test-is.theta.R tests/testthat/test-MStep.R tests/testthat/test-PseudoEMAlgorithm.R tests/testthat/test-colSds-rowSds.R tests/testthat/test-SimulateGMCMData-SimulateGMMData.R tests/testthat/test-check.R tests/testthat/test-rho.transform-inv.rho.transform.R tests/testthat/test-dgmcm.loglik.R tests/test-all.R
src
src/Makevars
src/GMCM.cpp
src/Makevars.win
src/RcppExports.cpp
NAMESPACE
data
data/u133VsExon.RData
data/datalist
data/freshVsFrozen.RData
R
R/get.prob.R R/MStep.R R/fit.full.GMCM.R R/colSds.R R/logit.R R/dgmm.loglik.R R/SimulateGMCMData.R R/meta.gmcm.loglik.R R/cummean.R R/get.IDR2.R R/fit.meta.GMCM.R R/SimulateGMMData.R R/choose.theta.R R/rho.transform.R R/GMCM-package.R R/meta2full.R R/full2meta.R R/qgmm.marginal.R R/EMAlgortihm.R R/RcppExports.R R/EStep.R R/is.theta.R R/inv.logit.R R/pgmm.marginal.R R/theta2vector.R R/dgmcm.loglik.R R/inv.tt.R R/dgmm.loglik.marginal.R R/PseudoEMAlgorithm.R R/get.idr.R R/vector2theta.R R/tt.R R/inv.rho.transform.R R/Uhat.R R/rowSds.R R/rtheta.R
vignettes
vignettes/saved.RData
vignettes/GMCM-Standalone.R
vignettes/GMCM-JStatSoft.Rnw
vignettes/STS-27.jpg
vignettes/References.bib
README.md
MD5
build
build/vignette.rds
DESCRIPTION
man
man/rho.transform.Rd man/full2meta.Rd man/dgmcm.loglik.Rd man/GMCM-package.Rd man/tt.Rd man/rtheta.Rd man/colSds.Rd man/fit.meta.GMCM.Rd man/EMAlgorithm.Rd man/cummean.Rd man/choose.theta.Rd man/Uhat.Rd man/get.IDR.Rd man/logit.Rd man/fit.full.GMCM.Rd man/freshVsFrozen.Rd man/SimulateGMCMData.Rd man/is.theta.Rd man/PseudoEMAlgorithm.Rd man/EStep.Rd man/dmvnormal.Rd man/u133VsExon.Rd

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