GOplot: Visualization of Functional Analysis Data

Implementation of multilayered visualizations for enhanced graphical representation of functional analysis data. It combines and integrates omics data derived from expression and functional annotation enrichment analyses. Its plotting functions have been developed with an hierarchical structure in mind: starting from a general overview to identify the most enriched categories (modified bar plot, bubble plot) to a more detailed one displaying different types of relevant information for the molecules in a given set of categories (circle plot, chord plot, cluster plot, Venn diagram, heatmap).

AuthorWencke Walter [aut, cre], Fatima Sanchez-Cabo [aut]
Date of publication2016-03-30 20:35:02
MaintainerWencke Walter <wencke.walter@arcor.de>
LicenseGPL-2
Version1.0.2
https://github.com/wencke/wencke.github.io

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Files

GOplot
GOplot/inst
GOplot/inst/CITATION
GOplot/inst/doc
GOplot/inst/doc/GOplot_vignette.Rmd
GOplot/inst/doc/GOplot_vignette.R
GOplot/inst/doc/GOplot_vignette.html
GOplot/NAMESPACE
GOplot/NEWS.md
GOplot/data
GOplot/data/EC.rda
GOplot/R
GOplot/R/Helper.R GOplot/R/GOVenn.R GOplot/R/GOCluster.R GOplot/R/GOHeat.R GOplot/R/GOCore.R
GOplot/vignettes
GOplot/vignettes/GOBubble2.png
GOplot/vignettes/GOBubble3.png
GOplot/vignettes/GOBubble1.png
GOplot/vignettes/GOBubble4.png
GOplot/vignettes/Titel.png
GOplot/vignettes/GOChord1.png
GOplot/vignettes/GOVenn.png
GOplot/vignettes/GOplot_vignette.Rmd
GOplot/vignettes/GOCluster.png
GOplot/vignettes/GOBar.png
GOplot/vignettes/GOCirc.png
GOplot/vignettes/GOHeat_nolfc.png
GOplot/vignettes/GOplot.css
GOplot/vignettes/GOCluster2.png
GOplot/vignettes/GOHeat_lfc.png
GOplot/README.md
GOplot/MD5
GOplot/build
GOplot/build/vignette.rds
GOplot/DESCRIPTION
GOplot/man
GOplot/man/chord_dat.Rd GOplot/man/EC.Rd GOplot/man/GOCluster.Rd GOplot/man/GOCircle.Rd GOplot/man/GOHeat.Rd GOplot/man/reduce_overlap.Rd GOplot/man/circle_dat.Rd GOplot/man/GOBar.Rd GOplot/man/GOBubble.Rd GOplot/man/GOChord.Rd GOplot/man/GOVenn.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.