Man pages for GPseq
gpseq: Using the generalized Poisson distribution to model sequence read counts from high throughput sequencing experiments
| calc_chisq_statistic | Calculate Chi-square goodness of fit Statistic for... |
| estimate_differential_expression | Estimating differential expression statistics for Genes... |
| estimate_differential_splicing | Estimating differential splicing statistics for an exon in a... |
| estimate_exon_gene_expression | Estimating Exon and Gene Expressions using the Poisson and... |
| exons | Exon Annotation Database |
| generalized_poisson_likelihood | Maximum Likelihood Estimates for the Generalized Poisson... |
| genes | Gene annotations |
| likelihood_ratio_generalized_poisson_exon_gene | Log Likelihood ratio statistic for comparison of the splicing... |
| likelihood_ratio_poisson_exon_gene | Log Likelihood ratio statistic for comparison of the splicing... |
| likelihood_ratio_tissue_generalized_poisson | Chi Square test statistic for comparison of expression levels... |
| likelihood_ratio_tissue_poisson | Chi Square test statistic for comparison of expression levels... |
| perform_permutation_de | Perform a Permutation Test to fit the null distribution of... |
| perform_permutation_ds | Perform a Permutation Test to fit the null distribution of... |
| reads | Mapped Reads |
