GSA: Gene set analysis
Version 1.03

Gene set analysis

AuthorBrad Efron and R. Tibshirani
Date of publication2010-01-04 20:32:06
MaintainerRob Tibshirani <tibs@stat.stanford.edu>
LicenseLGPL
Version1.03
URL http://www-stat.stanford.edu/~tibs/GSA
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("GSA")

Popular man pages

GSA: Gene set analysis
GSA.correlate: "Correlates" a gene set collection with a given list of gene...
GSA.genescores: Individual gene scores from a gene set analysis
GSA.internal: Internal GSA functions
GSA.listsets: List the results from a Gene set analysis
GSA.make.features: Creates features from a GSA analysis that can be used in...
GSA.plot: Plot the results from a Gene set analysis
See all...

All man pages Function index File listing

Man pages

GSA: Gene set analysis
GSA.correlate: "Correlates" a gene set collection with a given list of gene...
GSA.func: Gene set analysis without permutations
GSA.genescores: Individual gene scores from a gene set analysis
GSA.internal: Internal GSA functions
GSA.listsets: List the results from a Gene set analysis
GSA.make.features: Creates features from a GSA analysis that can be used in...
GSA.plot: Plot the results from a Gene set analysis
GSA.read.gmt: Read in a gene set collection from a .gmt file

Functions

GSA Man page Source code
GSA.correlate Man page Source code
GSA.func Man page Source code
GSA.genescores Man page Source code
GSA.listsets Man page Source code
GSA.make.features Man page Source code
GSA.plot Man page Source code
GSA.read.gmt Man page Source code
GSA.xl.correlate Man page Source code
GSA.xl.genescores Man page Source code
GSA.xl.plot Man page Source code
GSA.xl.summary Man page
GSA.xl.summary.genesets Man page Source code
cox.func Man page Source code
coxscor Source code
coxstuff Man page Source code
coxvar Man page Source code
est.s0 Source code
ests0 Man page
multiclass.func Man page Source code
paired.perm Source code
paired.ttest.func Source code
print.GSA Man page Source code
print.GSA.func Man page Source code
quantitative.func Man page Source code
summary.GSA.genesets Man page Source code
tCorr.func Source code
taCorr.func Source code
ttest.func Man page Source code
varr Man page Source code

Files

DESCRIPTION
NAMESPACE
INDEX
man
man/GSA.listsets.Rd
man/GSA.plot.Rd
man/GSA.Rd
man/GSA.func.Rd
man/GSA.correlate.Rd
man/GSA.genescores.Rd
man/GSA.make.features.Rd
man/GSA.read.gmt.Rd
man/GSA.internal.Rd
R
R/GSA.correlate.R
R/GSA.func.R
R/GSA.listsets.R
R/GSA.make.features.R
R/GSA.morefuns.R
R/GSA.plot.R
R/GSA.R
R/GSA.read.gmt.R
R/print.GSA.func.R
R/print.GSA.R
R/summary.GSA.genesets.R
R/GSA.genescores.R
R/GSA.xlfuns.R
R/GSA.xl.genescores.R
GSA documentation built on May 19, 2017, 8:19 a.m.

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