GSAgm: Gene Set Analysis using the Gamma Method
Version 1.0

GSAgm is an R package that completes a self-contained gene set analysis (GSA) for RNA-seq and SNP data using the Gamma Method.

AuthorRama Raghavan, Alice Wang
Date of publication2014-04-21 16:51:25
MaintainerRama Raghavan <rraghavan@kumc.edu>
LicenseGPL-2
Version1.0
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("GSAgm")

Getting started

Package overview

Popular man pages

gene_example: Gene example data
GSAgm-package: GSAgm package
PCgamma: PC gamma
RNAgamma: RNA gamma
rnaseq_counts: RNA Seq Test data
STTtoShapeParameter: Soft Truncation Threshold
testdata: Test data
See all...

All man pages Function index File listing

Man pages

gene_example: Gene example data
GSAgm-package: GSAgm package
PCgamma: PC gamma
RNAgamma: RNA gamma
rnaseq_counts: RNA Seq Test data
STTtoShapeParameter: Soft Truncation Threshold
testdata: Test data

Functions

GSAgm Man page
GSAgm-package Man page
PCgamma Man page Source code
RNAgamma Man page Source code
STTtoShapeParameter Man page Source code
gene_example Man page
rnaseq_counts Man page
testdata Man page

Files

NAMESPACE
data
data/testdata.rda
data/rnaseq_counts.rda
data/gene_example.rda
R
R/RNAgamma.R
R/STTtoShapeParameter.R
R/PCgamma.R
MD5
DESCRIPTION
man
man/STTtoShapeParameter.Rd
man/GSAgm-package.Rd
man/gene_example.Rd
man/PCgamma.Rd
man/rnaseq_counts.Rd
man/testdata.Rd
man/RNAgamma.Rd
GSAgm documentation built on May 19, 2017, 7:24 p.m.

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