GSAgm: Gene Set Analysis using the Gamma Method

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GSAgm is an R package that completes a self-contained gene set analysis (GSA) for RNA-seq and SNP data using the Gamma Method.

Author
Rama Raghavan, Alice Wang
Date of publication
2014-04-21 16:51:25
Maintainer
Rama Raghavan <rraghavan@kumc.edu>
License
GPL-2
Version
1.0

View on CRAN

Man pages

gene_example
Gene example data
GSAgm-package
GSAgm package
PCgamma
PC gamma
RNAgamma
RNA gamma
rnaseq_counts
RNA Seq Test data
STTtoShapeParameter
Soft Truncation Threshold
testdata
Test data

Files in this package

GSAgm
GSAgm/NAMESPACE
GSAgm/data
GSAgm/data/testdata.rda
GSAgm/data/rnaseq_counts.rda
GSAgm/data/gene_example.rda
GSAgm/R
GSAgm/R/RNAgamma.R
GSAgm/R/STTtoShapeParameter.R
GSAgm/R/PCgamma.R
GSAgm/MD5
GSAgm/DESCRIPTION
GSAgm/man
GSAgm/man/STTtoShapeParameter.Rd
GSAgm/man/GSAgm-package.Rd
GSAgm/man/gene_example.Rd
GSAgm/man/PCgamma.Rd
GSAgm/man/rnaseq_counts.Rd
GSAgm/man/testdata.Rd
GSAgm/man/RNAgamma.Rd