Files in GSSTDA

Progression Analysis of Disease with Survival using Topological Data Analysis

README.md R/GSSTDA_objects.R R/DSGA.R R/One_D_Mapper.R R/data.R R/Filter_Funct.R R/Mapper.R R/optimal_SVHT_coef.R R/gene_selection.R R/check_arguments.R R/GSSTDA.R inst/doc/GSSTDA-vignette.R inst/doc/GSSTDA-vignette.Rmd tests/testthat.R tests/testthat/test_flat_fun.R vignettes/GSSTDA-vignette.Rmd man/clust_all_levels.Rd man/get_intervals_One_D.Rd man/survival_event.Rd man/gene_selection.default.Rd man/compute_node_adjacency.Rd man/optimal_SVHT_coef_gamma_known.Rd man/check_gene_selection.Rd man/gene_selection_surv.Rd man/samples_in_levels.Rd man/results_dsga.Rd man/full_data.Rd man/lp_norm_k_powers_surv.Rd man/flatten_normal_tiss.Rd man/cox_all_genes.Rd man/survival_time.Rd man/check_filter_values.Rd man/case_tag.Rd man/plot_dsga.Rd man/gene_selection.dsga_object.Rd man/plot_mapper.Rd man/mapper.Rd man/generate_disease_component.Rd man/check_full_data.Rd man/clust_lev.Rd man/gene_selection_.Rd man/incMarPas.Rd man/levels_to_nodes.Rd man/denoise_rectangular_matrix.Rd man/gsstda.Rd man/gene_selection.Rd man/map_to_color.Rd man/check_vectors.Rd man/MedianMarcenkoPastur.Rd man/one_D_Mapper.Rd man/dsga.Rd man/optimal_SVHT_coef_gamma_unknown.Rd man/check_arg_mapper.Rd