check_vectors: check_vectors

In GSSTDA: Progression Analysis of Disease with Survival using Topological Data Analysis

check_vectors

Description

Checking the survival_time, survival_event and case_tag introduces in the GSSTDA object.

Usage

check_vectors(
  full_data,
  survival_time,
  survival_event,
  case_tag,
  control_tag,
  na.rm = TRUE
)

Arguments

full_data	The genes of the full_data (maybe remove by na.rm = TRUE)
survival_time	Time between disease diagnosis and event (if there was no event until the end of follow-up).
survival_event	logical. Whether or not the event has occurred.
case_tag	The tag of the healthy sample (healthy or not).
control_tag	Tag of the healthy sample.E.g. "T"
na.rm	logical. If TRUE, NA rows are omitted. If FALSE, an error occurs in case of NA rows.

Value

control_tag Return the tag of the healthy sample.

GSSTDA documentation built on June 22, 2024, 10:44 a.m.