chr6: Maize Fst Data

In GenWin: Spline Based Window Boundaries for Genomic Analyses

Maize Fst Data

Description

Data from 85,388 SNPs on chromosome 6 of a maize, in a selection experiment involving 30 generations of selection for increased number of ears per plant The variables are:

• Chromosome. Chromosome 6, always.

• Position. SNP position on maize reference version 2.

• C0Freq. Frequency of minor allele in cycle 0.

• C30Freq. Frequency of same allele in C30 (not necessarily minor)

• Fst. Fst value based on C0 and C30 frequencies.

Usage

data(chr6)

Format

A data frame with 85,388 rows and 5 columns.

References

Beissinger et al. (2014) Genetics 196(3):829-840 (http://www.ncbi.nlm.nih.gov/pubmed/24381334)

GenWin documentation built on Nov. 25, 2022, 5:05 p.m.