sysBiolAlg_FastGlobalFit-class: Class '"sysBiolAlg_FastGlobalFit"'

In GlobalFit: Bi-Level Optimization of Metabolic Network Models

Description

Class, that builds the (fast) bilevel optimization object.

Objects from the Class

Objects can be created by calls of the form new("sysBiolAlg_FastGlobalFit", model, LPvariant, useNames, cnames, rnames, pname, scaling, penalties_hin, penalties_ruck, cancel_case_penalty, num_additional_reactions, not_delete_for, not_delete_back, del_pen_hin, del_pen_ruck, off, on, simple, reverse_hin, reverse_hin_penalty, reverse_back, reverse_back_penalty, MaxPenalty, alternatives_list, additional_biomass_metabolites, remove_biomass_metabolites, bio_stoich, use_indicator_constraints, variable_lower_bound, forced_alterations, writeProbToFileName, ...).

Slots

wu:

Object of class "numeric" ~~

wl:

Object of class "numeric" ~~

fnc:

Object of class "integer" ~~

fnr:

Object of class "integer" ~~

problem:

Object of class "optObj" ~~

algorithm:

Object of class "character" ~~

nr:

Object of class "integer" ~~

nc:

Object of class "integer" ~~

fldind:

Object of class "integer" ~~

alg_par:

Object of class "list" ~~

Extends

Class "sysBiolAlg", directly.

Methods

initialize

signature(.Object = "sysBiolAlg_FastGlobalFit"): ...

Author(s)

Daniel Hartleb

Examples

showClass("sysBiolAlg_GlobalFit")

GlobalFit documentation built on May 2, 2019, 5:07 a.m.