Man pages for HDMD
Statistical Analysis Tools for High Dimension Molecular Data (HDMD)
| AA54 | Normalized Amino Acid Indices quantifying 54 various... |
| AAMetric | Amino Acid Metric Solution using R (Atchley et al 2005) |
| AAMetric.Atchley | Amino Acid Metric Solution (Atchley et al 2005) |
| AminoAcids | Amino Acid Properties |
| bHLH288 | Alignment of basic Helix Loop Helix (bHLH) domain data |
| factor.pa.ginv | Principal Axis Factor Analysis when D>>N |
| FactorTransform | Metric Solution for Amino Acid characters |
| HDMD-package | Structural Analysis Tools for High Dimensional Molecular Data |
| Loadings.variation | Proportional and Cumulative Variation of Loading Components |
| MolecularEntropy | Molecular Entropy for DNA or Amino Acid Sequences |
| MolecularMI | Molecular Mutual Information |
| NMI | Normalized Mutual Information |
| pairwise.mahalanobis | Mahalanobis distances for grouped data |
| Promax.only | Promax rotation (without prior Varimax rotation) |
