AA54: Normalized Amino Acid Indices quantifying 54 various...
In HDMD: Statistical Analysis Tools for High Dimension Molecular Data (HDMD)
Description
Format
Source
Examples
Description
From approximately 500 indices listed in www.genome.jp/aaindex as of 2005, a sample of 54
Amino Acid Indices were selected to represent the range of structural and functional attributes. Each
index was normalized to have mean 0 and variation 1.
Format
AA54 is a matrix of 54 indices (columns) quantifying attributes for the 20 amino acids (rows). Amino acids
are represented by their single character abbreviation and sorted alphabetically. Indices are normalized
to have mean = 0 and variation = 1.
Source
www.genome.jp/aaindex
Examples
1
2
HDMD documentation built on May 1, 2019, 8:48 p.m.
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Description Format Source Examples
Description
From approximately 500 indices listed in www.genome.jp/aaindex as of 2005, a sample of 54 Amino Acid Indices were selected to represent the range of structural and functional attributes. Each index was normalized to have mean 0 and variation 1.
Format
AA54 is a matrix of 54 indices (columns) quantifying attributes for the 20 amino acids (rows). Amino acids are represented by their single character abbreviation and sorted alphabetically. Indices are normalized to have mean = 0 and variation = 1.
Source
www.genome.jp/aaindex
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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