vol_tp: Preparatory function for volcano plot

In HDXBoxeR: Analysis of Hydrogen-Deuterium Exchange Mass-Spectrometry Data

Preparatory function for volcano plot

Description

Returns volcano plots

Usage

vol_tp(df1, pv, CI, pv_cutoff = 0.01, cola)

Arguments

df1	differences in averages data.frame calculated using diff_ave function
pv	pvalues dataframes calculated using pv_timepoint function
CI	critical interval, here is multiple sets are using maximun CI is used.
pv_cutoff	p-value cutoff here set up to 0.01
cola	color pallette for different Protein States. As default Paired pallette from color.Brewer is used.

Value

volcano plots

HDXBoxeR documentation built on Sept. 11, 2024, 8:40 p.m.