annotateHiCBin: Annotate blocking regions with ChIP-seq data.
In HiCblock: Systematic Analysis of Architectural Proteins and Functional Elements in Blocking Long-Range Contacts Between Loci
Description
Usage
Arguments
Value
Author(s)
View source: R/HiCblockMiscFun.R
Description
This is an internal function (should not be used). Function to compute the average of the coverage of ChIP-seq peaks within blocking regions.
Usage
1
annotateHiCBin(HiC_bin.GR, GenomicFeature.GR)
Arguments
HiC_bin.GR
A GRanges object containing the Hi-C blocking regions.
GenomicFeature.GR
A GRanges object containing the genomic feature intervals with fold-enrichments (score).
Value
A vector object is returned.
Author(s)
Raphael Mourad
HiCblock documentation built on Aug. 20, 2019, 5:25 p.m.
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Description Usage Arguments Value Author(s)
View source: R/HiCblockMiscFun.R
Description
This is an internal function (should not be used). Function to compute the average of the coverage of ChIP-seq peaks within blocking regions.
Usage
1 | annotateHiCBin(HiC_bin.GR, GenomicFeature.GR)
|
Arguments
HiC_bin.GR |
A GRanges object containing the Hi-C blocking regions. |
GenomicFeature.GR |
A GRanges object containing the genomic feature intervals with fold-enrichments (score). |
Value
A vector object is returned.
Author(s)
Raphael Mourad
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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