Description Details Author(s) References Examples
The package contains two functions: estim_herit computes heritability when the random effects follow either a Gaussian distribution or a mixture of a Dirac and a Gaussian distribution. It also provides a confidence interval of heritability when the random effects are Gaussian. The function data_simu allows the user to generate dataset which are compatible wit the arguments of HiLMM.
Package: | HiLMM |
Type: | Package |
Version: | 1.0 |
Date: | 2014-04-10 |
License: | GPL-2 |
Anna Bonnet <anna.bonnet@agroparistech.fr>
The method is developped in the paper "Heritability estimation in sparse high dimensional linear mixed models" (A.Bonnet,E.Gassiat,C.Levy-Leduc,2014)
1 2 3 4 5 6 7 8 | library(HiLMM)
data_HiLMM=data_simu(100,1000,0.7,1)
Y=data_HiLMM$Y
W=data_HiLMM$W
estim_herit(Y,W)$heritability
estim_herit(Y,W)$CI_low
estim_herit(Y,W)$CI_up
estim_herit(Y,W)$standard_deviation
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.