estim_herit: Estimation of heritability in linear mixed models
In HiLMM: Estimation of Heritability in Linear Mixed Models
Description
Usage
Arguments
Value
Author(s)
References
Examples
Description
The function computes heritability when the random effects follow either a Gaussian distribution or a mixture of a Dirac and a Gaussian distribution.
It also provides a confidence interval of heritability when the random effects are Gaussian.
Usage
1
Arguments
Y
vector of observations of size n
W
matrix with n rows and N columns
Value
heritability
Heritability
CI_low
Lower bound of the confidence interval
CI_up
Upper bound of the confidence interval
standard_deviation
Standard deviation
Author(s)
Anna Bonnet
References
The method is developped in the paper "Heritability estimation in high dimensional linear mixed models" (A.Bonnet,E.Gassiat,C.L??vy-Leduc,2014)
Examples
1
2
3
4
5
6
7
library(HiLMM)
data(Y)
data(W)
estim_herit(Y,W)$heritability
estim_herit(Y,W)$CI_low
estim_herit(Y,W)$CI_up
estim_herit(Y,W)$standard_deviation
HiLMM documentation built on May 2, 2019, 6:59 a.m.
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Description Usage Arguments Value Author(s) References Examples
Description
The function computes heritability when the random effects follow either a Gaussian distribution or a mixture of a Dirac and a Gaussian distribution. It also provides a confidence interval of heritability when the random effects are Gaussian.
Usage
1 |
Arguments
Y |
vector of observations of size n |
W |
matrix with n rows and N columns |
Value
heritability |
Heritability |
CI_low |
Lower bound of the confidence interval |
CI_up |
Upper bound of the confidence interval |
standard_deviation |
Standard deviation |
Author(s)
Anna Bonnet
References
The method is developped in the paper "Heritability estimation in high dimensional linear mixed models" (A.Bonnet,E.Gassiat,C.L??vy-Leduc,2014)
Examples
1 2 3 4 5 6 7 | library(HiLMM)
data(Y)
data(W)
estim_herit(Y,W)$heritability
estim_herit(Y,W)$CI_low
estim_herit(Y,W)$CI_up
estim_herit(Y,W)$standard_deviation
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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