computeWAIC: computeWAIC

In Hmsc: Hierarchical Model of Species Communities

computeWAIC

Description

Computes the value of WAIC (Widely Applicable Information Criterion) for the Hmsc model

Usage

computeWAIC(hM, ghN = 11, byColumn = FALSE)

Arguments

hM	a fitted Hmsc model object
ghN	order of Gauss-Hermite quadrature for approximate numerical integration
byColumn	describes whether WAIC is computed for the entire model byColumn=FALSE or for each column (i.e. species) byColumn=TRUE

Details

The result is exact for normal and probit observational models. For Poisson-type observational model the result is obtained through numerical integration using Gauss-Hermite quadrature.

Value

the scalar WAIC

Examples

# Compute WAIC of previously sampled Hmsc object
WAIC = computeWAIC(TD$m)

Hmsc documentation built on Aug. 11, 2022, 5:11 p.m.