HyPhy: Macroevolutionary phylogentic analysis of species trees and gene trees

A Bay Area high level phylogenetic analysis package mostly using the birth-death process. Analysis of species tree branching times and simulation of species trees under a number of different time variable birth-death processes. Analysis of gene tree species tree reconciliations and simulations of gene trees in species trees.

Package details

AuthorNathaniel Malachi Hallinan
MaintainerNathaniel Malachi Hallinan <[email protected]>
Package repositoryView on CRAN
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HyPhy documentation built on May 30, 2017, 7:09 a.m.