IBDLabels: Convert Between Different IBD-State Labelling Schemes

Convert "label", "lexicographic", "jacquard" and "vec", full state description vector. All conversions are done to and from "label", as used in IBD_Haplo. More information regarding IBD_Haplo can be found at http://www.stat.washington.edu/thompson/Genepi/pangaea.shtml.

Install the latest version of this package by entering the following in R:
install.packages("IBDLabels")
AuthorFiona Grimson
Date of publication2015-02-17 01:07:25
MaintainerFiona Grimson <fgrimson@uw.edu>
LicenseGPL-3
Version1.1

View on CRAN

Files

inst
inst/doc
inst/doc/IBDLabels_tutorial.Rnw
inst/doc/IBDLabels_tutorial.pdf
inst/doc/IBDLabels_tutorial.R
NAMESPACE
R
R/allJaq.R R/vec2label.R R/allStates.R R/allVec.R R/allLex.R R/label2jaq.R R/maxlabel.R R/label2lex.R R/lex2label.R R/fgl2vec.R R/jaq2label.R R/label2vec.R
vignettes
vignettes/IBDLabels_tutorial.Rnw
vignettes/states
vignettes/states/s9.png
vignettes/states/s2.png
vignettes/states/s13.png
vignettes/states/s12.png
vignettes/states/s14.png
vignettes/states/s1.png
vignettes/states/s7.png
vignettes/states/s10.png
vignettes/states/s6.png
vignettes/states/s11.png
vignettes/states/s8.png
vignettes/states/s15.png
vignettes/states/s4.png
vignettes/states/s3.png
vignettes/states/ibdstates.svg
vignettes/states/s5.png
MD5
build
build/vignette.rds
DESCRIPTION
man
man/allLex.Rd man/maxlabel.Rd man/allStates.Rd man/allVec.Rd man/allJaq.Rd man/anRpackage-package.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.