convert_hm_genes: Convert Human/Mouse Gene IDs between Ensembl and Hugo Symbol...
In IDConverter: Convert Identifiers in Biological Databases

View source: R/common_human_and_mouse_ids.R

convert_hm_genes

R Documentation

Convert Human/Mouse Gene IDs between Ensembl and Hugo Symbol System

Description

Convert Human/Mouse Gene IDs between Ensembl and Hugo Symbol System

Usage

convert_hm_genes(
  IDs,
  type = c("ensembl", "symbol"),
  genome_build = c("hg38", "hg19", "mm10", "mm9"),
  multiple = FALSE
)

Arguments

`IDs`	a character vector to convert.
`type`	type of input `IDs`, could be 'ensembl' or 'symbol'.
`genome_build`	reference genome build.
`multiple`	if `TRUE`, return a `data.table` instead of a string vector, so multiple identifier mappings can be kept.

Value

a vector or a data.table.

Examples


convert_hm_genes("ENSG00000243485")
convert_hm_genes("ENSG00000243485", multiple = TRUE)
convert_hm_genes(c("TP53", "KRAS", "EGFR", "MYC"), type = "symbol")

IDConverter documentation built on March 31, 2023, 10:25 p.m.