convert_tcga: Convert TCGA Identifiers

In IDConverter: Convert Identifiers in Biological Databases

Convert TCGA Identifiers

Description

Run data("tcga") to see detail database for conversion.

Usage

convert_tcga(x, from = "sample_id", to = "submitter_id", multiple = FALSE)

Arguments

x	A character vector to convert.
from	Which identifier type to be converted. One of .
to	Identifier type convert to. Same as parameter from.
multiple	if TRUE, return a data.table instead of a string vector, so multiple identifier mappings can be kept.

Value

A character vector.

Examples

x <- convert_tcga("TCGA-02-0001-10")
x

## Not run: 
convert_tcga("TCGA-02-0001-10A-01W-0188-10")

## End(Not run)

IDConverter documentation built on March 31, 2023, 10:25 p.m.