API for INLAvaan
Approximate Bayesian Latent Variable Analysis
| Global functions | |
|---|---|
| .gauss_hermite | Source code |
| .onLoad | Source code |
| .plog | Source code |
| .plog_iterate | Source code |
| .qsn_std_fast | Source code |
| AIC,INLAvaan-method | Man page |
| BIC,INLAvaan-method | Man page |
| INLAvaan | Man page |
| INLAvaan-class | Man page |
| INLAvaan-package | Man page |
| acfa | Man page Source code |
| add_loo | Man page Source code |
| add_loo_group_column | Source code |
| add_timing | Source code |
| agrowth | Man page Source code |
| anova | Man page |
| anova,INLAvaan-method | Man page |
| apply_rows | Source code |
| as_fun_string | Man page Source code |
| asem | Man page Source code |
| bfit_indices | Man page Source code |
| block_lv_names | Source code |
| block_ov_names | Source code |
| build_newdata | Source code |
| call_next_lavaan_method | Source code |
| check_casewise_per_cluster | Source code |
| check_composite_covariances | Source code |
| check_composite_derived | Source code |
| check_composite_labels | Source code |
| check_composite_means | Source code |
| check_composite_scope | Source code |
| check_composite_weights | Source code |
| check_loo_model | Source code |
| check_loo_units | Source code |
| check_packed_kinds | Source code |
| check_per_cluster | Source code |
| check_rs_casewise | Source code |
| check_rs_ceq | Source code |
| check_rs_comparable | Source code |
| check_rs_moments | Source code |
| check_rs_within_only | Source code |
| check_rs_zero_var | Source code |
| chol_cov_block | Source code |
| cli_escape | Source code |
| coef | Man page |
| coef,INLAvaan-method | Man page |
| coef_inlavaan | Source code |
| compare | Man page |
| compare,INLAvaan-method | Man page |
| compare.inlavaan_internal | Source code |
| compare_impl | Source code |
| compare_mcmc | Source code |
| composite_as_lisrel | Source code |
| composite_blocks | Source code |
| composite_derived_draws | Source code |
| composite_derived_rows | Source code |
| composite_fixed_t | Source code |
| composite_rescale_x | Source code |
| composite_scale_plan | Source code |
| composite_scales | Source code |
| composite_set_rows | Source code |
| composite_start_weights | Source code |
| composite_t_key | Source code |
| composite_t_rows | Source code |
| composite_variances | Source code |
| compute_BCFI | Source code |
| compute_BGammaHat | Source code |
| compute_BMc | Source code |
| compute_BNFI | Source code |
| compute_BRMSEA | Source code |
| compute_BTLI | Source code |
| compute_adjBGammaHat | Source code |
| compute_chisq_dev | Source code |
| compute_gamma1j | Source code |
| compute_implied_moments | Source code |
| compute_implied_moments_ml | Source code |
| compute_loglik_sat | Source code |
| compute_rescaled_quantities | Source code |
| constraint_side | Source code |
| count_sample_moments | Source code |
| cov_pd_check | Source code |
| create_lav_from_inlavaan_internal | Source code |
| dbeta_box | Man page Source code |
| def_function_in_pt_order | Source code |
| defined_draws | Source code |
| density_mode | Source code |
| deviance | Man page |
| deviance.INLAvaan | Man page Source code |
| diagnostics | Man page |
| diagnostics,INLAvaan-method | Man page |
| diagnostics_internal | Source code |
| dmode | Source code |
| draw_eta | Source code |
| draw_eta_given | Source code |
| draw_latent_block | Source code |
| draw_marginalised_mean_shift | Source code |
| draw_ml_group | Source code |
| draw_observed_block | Source code |
| draw_residuals | Source code |
| dsnorm | Man page Source code |
| dummy_lv_idx | Source code |
| eta_intercepts | Source code |
| fast_grad | Source code |
| fast_hessian | Source code |
| fast_jacobian | Source code |
| fiml_patterns | Source code |
| fiml_scores_mu_vech | Source code |
| fitMeasures,INLAvaan-method | Man page |
| fit_independence_baseline | Source code |
| fit_skew_normal | Man page Source code |
| fit_skew_normal_samp | Man page Source code |
| fitmeasures | Man page |
| fitmeasures,INLAvaan-method | Man page |
| fitted | Man page |
| fitted,INLAvaan-method | Man page |
| fitted.values,INLAvaan-method | Man page |
| fork_is_safe | Source code |
| format_pe_col | Source code |
| format_share | Source code |
| free_param_keys | Source code |
| gamma_x | Source code |
| gauss_legendre_01 | Source code |
| get_SEM_param_matrix | Source code |
| get_block_param_matrix | Source code |
| get_defpars | Source code |
| get_dic | Source code |
| get_inlavaan_internal | Man page Source code |
| get_ppp | Source code |
| get_ppp_twolevel | Source code |
| get_thetaparamerization_deltas | Source code |
| ginv_base | Source code |
| has_composite_syntax | Source code |
| has_random_slopes | Source code |
| has_test | Source code |
| implied_block_moments | Source code |
| implied_bound | Source code |
| implied_cov_is_pd | Source code |
| implied_joint_moments | Source code |
| inlav_fit_measures | Source code |
| inlav_fitmeasures_method | Source code |
| inlav_loo | Source code |
| inlav_model_grad | Source code |
| inlav_model_loglik | Source code |
| inlav_waic | Source code |
| inlavaan | Man page Source code |
| inlavaanify_partable | Source code |
| is_INLAvaan | Source code |
| is_bad_cov | Source code |
| is_blavaan | Source code |
| is_constant | Source code |
| is_independence_partable | Source code |
| is_inlavaan | Source code |
| is_lavaan | Source code |
| is_multilevel | Source code |
| is_same_function | Man page Source code |
| loco_grad_x_one | Source code |
| loco_grad_x_us | Source code |
| loco_loglik_one | Source code |
| loco_loglik_us | Source code |
| loco_missing_build_cj | Source code |
| loco_missing_grad_cj | Source code |
| loco_missing_grad_x_one | Source code |
| loco_missing_info | Source code |
| loco_missing_loglik_cj | Source code |
| loco_missing_loglik_one | Source code |
| loco_missing_minus_row | Source code |
| loco_missing_scores_theta | Source code |
| loco_rs_loglik_all | Source code |
| loco_rs_scores_theta | Source code |
| loco_rs_split_const | Source code |
| loco_scores_theta | Source code |
| loco_stats_build | Source code |
| loco_suff_stats | Source code |
| loco_unit_stats | Source code |
| logLik | Man page |
| logLik,INLAvaan-method | Man page |
| loo | Man page Source code |
| loo.INLAvaan | Man page Source code |
| loo.inlavaan_internal | Man page Source code |
| loo_batched_hessians | Source code |
| loo_cat_note | Source code |
| loo_cat_rule | Source code |
| loo_chain_rule | Source code |
| loo_drop_empty_units | Source code |
| loo_fixedx_const_cluster | Source code |
| loo_fixedx_const_loco | Source code |
| loo_fixedx_const_raw | Source code |
| loo_fixedx_info_loco | Source code |
| loo_fixedx_missing_loco | Source code |
| loo_fixedx_missing_rowdiff | Source code |
| loo_fixedx_rowdiff_loco | Source code |
| loo_flavour | Source code |
| loo_grad_cache | Source code |
| loo_headline_pointwise | Source code |
| loo_implied_moments | Source code |
| loo_print_curvature | Source code |
| loo_rule_label | Source code |
| loso2l_loglik_all | Source code |
| loso2l_minus_stats | Source code |
| loso2l_missing_loglik_all | Source code |
| loso2l_missing_scores_theta | Source code |
| loso2l_scores_theta | Source code |
| loso_data_view | Source code |
| loso_fixedx_const_units | Source code |
| loso_loglik_all | Source code |
| loso_loglik_units | Source code |
| loso_observed_units | Source code |
| loso_resolve_units | Source code |
| loso_scores_theta | Source code |
| loso_scores_units | Source code |
| loso_t_deletion_units | Source code |
| loso_t_downdates | Source code |
| loso_t_jackknife | Source code |
| make_pd | Source code |
| marg_lp | Source code |
| marginalised_means_active | Source code |
| marginalised_means_loglik_corr | Source code |
| marginalised_samplestats | Source code |
| mask_quotes | Source code |
| match_partable_rows | Source code |
| mills_ratio | Source code |
| ml_discrepancy | Source code |
| ml_latent_names | Source code |
| ml_moments | Source code |
| model_expr_name | Source code |
| muffle_em_warnings | Source code |
| muffle_ml_sim_warning | Source code |
| muffle_nan_warnings | Source code |
| muffle_rs_test_warning | Source code |
| mvn_loglik_rows | Source code |
| mvn_scores_rows | Source code |
| nobs | Man page |
| nobs,INLAvaan-method | Man page |
| norta_adjust_R | Source code |
| optim_convergence | Source code |
| owen_t | Source code |
| pack_constraints | Source code |
| pars_to_x | Source code |
| partable_classify_sem_matrix | Source code |
| partable_level_index | Source code |
| partable_level_labels | Source code |
| partable_prior_from_row | Source code |
| partable_row_name | Source code |
| partable_transform_funcs | Source code |
| plot | Man page |
| plot,INLAvaan,ANY-method | Man page |
| plot.inlavaan_internal | Source code |
| post_marg_asymgaus | Source code |
| post_marg_marggaus | Source code |
| post_marg_sampling | Source code |
| post_marg_skewnorm | Source code |
| ppp2l_cluster_stats | Source code |
| ppp2l_conditional_draw | Source code |
| ppp2l_design | Source code |
| ppp2l_draw | Source code |
| ppp2l_draw_stats | Source code |
| ppp2l_fixed_both | Source code |
| ppp2l_group_moments | Source code |
| ppp2l_info | Source code |
| ppp2l_kron_dup_half | Source code |
| ppp2l_loglik | Source code |
| ppp2l_m2ll | Source code |
| ppp2l_onestep | Source code |
| ppp2l_pack | Source code |
| ppp2l_unpack | Source code |
| ppp2l_vech | Source code |
| ppp2l_vech_rev | Source code |
| ppp_composite_draw | Source code |
| ppp_discrepancy | Source code |
| predict | Man page |
| predict,INLAvaan-method | Man page |
| predict.inlavaan_internal | Source code |
| prepare_priors_for_optim | Source code |
| print.bfit_indices | Man page Source code |
| print.compare.inlavaan_internal | Source code |
| print.diagnostics.INLAvaan | Source code |
| print.diagnostics.INLAvaan.param | Source code |
| print.fitmeasures.inlavaan_internal | Source code |
| print.inlavaan_deviance | Source code |
| print.inlavaan_internal | Source code |
| print.inlavaan_logLik | Source code |
| print.inlavaan_loo | Man page Source code |
| print.inlavaan_waic | Man page Source code |
| print.predict.inlavaan_internal | Source code |
| print.summary.inlavaan_internal | Source code |
| print.summary.predict.inlavaan_internal | Source code |
| print.timing.INLAvaan | Source code |
| prior_grad_vectorized | Source code |
| prior_logdens_vectorized | Source code |
| priors_for | Man page Source code |
| prodfac_lp | Source code |
| psd_root | Source code |
| psd_solve | Source code |
| psnorm | Source code |
| qsnorm_fast | Man page Source code |
| recode_ordinal | Source code |
| reconstruct_lavoptions | Source code |
| relabel_clusters | Source code |
| resid,INLAvaan-method | Man page |
| residuals | Man page |
| residuals,INLAvaan-method | Man page |
| resolve_baseline_model | Source code |
| resolve_deprecated_Sigma | Source code |
| resolve_lavaan_internals | Source code |
| resolve_loo_cores | Source code |
| resolve_test | Source code |
| rs_avg_glist | Source code |
| rs_avg_implied | Source code |
| rs_avg_object | Source code |
| rs_baseline_fit | Source code |
| rs_baseline_slope | Source code |
| rs_baseline_start | Source code |
| rs_baseline_syntax | Source code |
| rs_casewise | Source code |
| rs_cluster_compare | Source code |
| rs_cluster_data | Source code |
| rs_cluster_moments | Source code |
| rs_draw_outcomes | Source code |
| rs_draw_within | Source code |
| rs_eta_mean | Source code |
| rs_eta_moments | Source code |
| rs_fitted | Source code |
| rs_glist_block | Source code |
| rs_grad_is_packed | Source code |
| rs_implied_pieces | Source code |
| rs_info_of | Source code |
| rs_is_casewise | Source code |
| rs_per_cluster | Source code |
| rs_predict_y | Source code |
| rs_psd_root | Source code |
| rs_residual_type | Source code |
| rs_residuals | Source code |
| rs_row_key | Source code |
| rs_rsquare | Source code |
| rs_scored_sets | Source code |
| rs_simulate | Source code |
| rs_spec | Source code |
| rs_std_values | Source code |
| rs_transform_class | Source code |
| rs_unpack_grad | Source code |
| rs_v_mean | Source code |
| rs_within_parts | Source code |
| rs_without_flags | Source code |
| rs_y_given_v | Source code |
| run_parallel_or_serial | Source code |
| safe_tanh | Source code |
| sample_covariances | Source code |
| sample_covariances_fit_sn | Source code |
| sample_defpars | Source code |
| sample_generative_ml | Source code |
| sample_latent_from_model | Source code |
| sample_observed_from_model | Source code |
| sample_params | Source code |
| sample_params_posterior | Source code |
| sample_params_prior | Source code |
| sampling | Man page |
| sampling,INLAvaan-method | Man page |
| sampling.inlavaan_internal | Source code |
| sampling_generative_ml | Source code |
| sampling_impl | Source code |
| sampling_prior_generative | Source code |
| saturated_mean_idx | Source code |
| scored_vars | Source code |
| show | Man page |
| show,INLAvaan-method | Man page |
| show_inlavaan | Source code |
| simulate | Man page |
| simulate,INLAvaan-method | Man page |
| sobol_owen | Source code |
| split_modifiers | Source code |
| split_term | Source code |
| split_top_level | Source code |
| standardisedSolution | Man page Source code |
| standardisedsolution | Man page Source code |
| standardizedSolution | Man page Source code |
| standardizedsolution | Man page Source code |
| summarise_samples | Source code |
| summarise_samples_sn | Source code |
| summary | Man page |
| summary,INLAvaan-method | Man page |
| summary.bfit_indices | Man page Source code |
| summary.inlavaan_internal | Source code |
| summary.inlavaan_loo | Man page Source code |
| summary.inlavaan_waic | Man page Source code |
| summary.predict.inlavaan_internal | Source code |
| summary_inlavaan | Source code |
| taylor_loo_unit | Source code |
| test_record | Source code |
| theta_root | Source code |
| timing | Man page |
| timing,INLAvaan-method | Man page |
| twolevel_fixedx_loglik_adj | Source code |
| update | Man page |
| update,INLAvaan-method | Man page |
| vb_nodes | Source code |
| vb_nodes_gauss_hermite | Source code |
| vcov | Man page |
| vcov,INLAvaan-method | Man page |
| vech_idx | Source code |
| visual_debug | Source code |
| waic | Man page Source code |
| waic.INLAvaan | Man page Source code |
| waic.inlavaan_internal | Man page Source code |
| waic_from_taylor | Source code |
| warn_fit_diagnostics | Source code |
| warn_rs_left_out | Source code |
| warn_rs_route_b | Source code |
| warn_undefined_draws | Source code |
