| priors_for | R Documentation |
Specify priors for a SEM, similar to how blavaan::dpriors() works.
priors_for(...)
... |
Named arguments specifying prior distributions for lavaan parameter types. |
This function provides a convenient way to specify prior distributions for different types of parameters in a structural equation model (SEM). It uses a registry of default priors for common lavaan parameter types (e.g., loadings, regressions, residuals, etc.) and allows users to override these defaults by passing named arguments.
The parameter names, and default settings, are:
nu = "normal(0,32)": Observed variable intercepts
alpha = "normal(0,10)": Latent variable intercepts
lambda = "normal(0,10)": Factor loadings
beta = "normal(0,10)": Regression coefficients
theta = "gamma(1,.5)[sd]": Residual precisions
psi = "gamma(1,.5)[sd]": Latent variable precisions
rho = "beta(1,1)": Correlations (both latent and observed)
tau = "normal(0,1.5)": Thresholds for ordinal variables
Note that the normal distributions are parameterised using standard
deviations, and not variances. For example, normal(0,10) means a
normal distribution with mean 0 and standard deviation 10 (not variance 10).
A named character vector of prior specifications, where names
correspond to lavaan parameter types (e.g., "lambda", "beta", "theta",
etc.) and values are character strings specifying the prior distribution
(e.g., "normal(0,10)", "gamma(1,0.5)[sd]",
"gamma(1,1)[prec]", etc.).
For variance parameters (theta, psi), the prior distribution
can be placed on a transformed scale by appending a qualifier:
[sd]: Prior is on the standard deviation \sigma.
Example: "gamma(1,0.5)[sd]" places a Gamma(1, 0.5) prior on
\sigma = \sqrt{\text{variance}}.
[prec]: Prior is on the precision \tau = 1/\sigma^2.
Example: "gamma(1,1)[prec]" places a Gamma(1, 1) prior on
\tau = 1/\text{variance}. This is the parameterisation used by
blavaan and corresponds to an Inverse-Gamma prior on the variance.
The necessary Jacobian adjustment is applied automatically in both cases.
inlavaan(), acfa(), asem(), agrowth()
priors_for(nu = "normal(0,10)", lambda = "normal(0,1)", rho = "beta(3,3)")
# Precision-scale prior for residual variances (blavaan-style)
priors_for(theta = "gamma(1,1)[prec]")
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