InfiniumPurify: Estimate and Account for Tumor Purity in Cancer Methylation Data Analysis
Version 1.3.1

The proportion of cancer cells in solid tumor sample, known as the tumor purity, has adverse impact on a variety of data analyses if not properly accounted for. We develop 'InfiniumPurify', which is a comprehensive R package for estimating and accounting for tumor purity based on DNA methylation Infinium 450k array data. 'InfiniumPurify' provides functionalities for tumor purity estimation. In addition, it can perform differential methylation detection and tumor sample clustering with the consideration of tumor purities.

Getting started

Package details

AuthorYufang Qin
Date of publication2017-01-14 12:12:25
MaintainerYufang Qin <[email protected]>
LicenseGPL-2
Version1.3.1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("InfiniumPurify")

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InfiniumPurify documentation built on May 29, 2017, 12:17 p.m.