Description Usage Arguments Author(s) References Examples
Print tumor types and their abbreviations with known informative DMCs.
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None.
Xiaoqi Zheng xqzheng@shnu.edu.cn.
X. Zheng, N. Zhang, H.J. Wu and H. Wu, Estimating and accounting for tumor purity in the analysis of DNA methylation data from cancer studies. Genome biology, in revision.
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Abbreviation
1 ACC
2 BLCA
3 BRCA
4 CESC
5 CHOL
6 COAD
7 DLBC
8 ESCA
9 GBM
10 HNSC
11 KICH
12 KIRC
13 KIRP
14 LAML
15 LGG
16 LIHC
17 LUAD
18 LUSC
19 MESO
20 OV
21 PAAD
22 PCPG
23 PRAD
24 SARC
25 SKCM
26 STAD
27 TGCT
28 THCA
29 THYM
30 UCEC
31 UCS
32 UVM
Cancer.type
1 Adrenocortical carcinoma
2 Bladder Urothelial Carcinoma
3 Breast invasive carcinoma
4 Cervical squamous cell carcinoma and endocervical adenocarcinoma
5 Cholangiocarcinoma
6 Colon adenocarcinoma
7 Lymphoid Neoplasm Diffuse Large B-cell Lymphoma
8 Esophageal carcinoma
9 Glioblastoma multiforme
10 Head and Neck squamous cell carcinoma
11 Kidney Chromophobe
12 Kidney renal clear cell carcinoma
13 Kidney renal papillary cell carcinoma
14 Acute Myeloid Leukemia
15 Brain Lower Grade Glioma
16 Liver hepatocellular carcinoma
17 Lung adenocarcinoma
18 Lung squamous cell carcinoma
19 Mesothelioma
20 Ovarian serous cystadenocarcinoma
21 Pancreatic adenocarcinoma
22 Pheochromocytoma and Paraganglioma
23 Prostate adenocarcinoma
24 Sarcoma
25 Skin Cutaneous Melanoma
26 Stomach adenocarcinoma
27 Testicular Germ Cell Tumors
28 Thyroid carcinoma
29 Thymoma
30 Uterine Corpus Endometrial Carcinoma
31 Uterine Carcinosarcoma
32 Uveal Melanoma
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