API for IxPopDyMod
Framework for Tick Population and Infection Modeling
| Global functions | |
|---|---|
| annual_growth_rate | Man page Source code |
| assert_initial_population_has_valid_life_stages | Source code |
| assert_initial_population_non_zero | Source code |
| assert_inputs_to_each_transition_function_are_valid | Source code |
| assert_jday_entirely_na_or_numeric | Source code |
| assert_max_one_duration_transition_from_each_stage | Source code |
| assert_no_duplicate_transitions | Source code |
| assert_no_tick_density_predictors_have_first_day_only_false | Source code |
| assert_only_one_transition_type_from_each_stage | Source code |
| assert_predictor_data_extends_over_required_days | Source code |
| assert_predictor_extends_up_to_max_day | Source code |
| assert_predictors_are_ordered | Source code |
| assert_predictors_strings_in_transitions_are_valid | Source code |
| assert_transition_accompanies_each_mortality | Source code |
| coerce_element | Source code |
| config | Man page Source code |
| config_ex_1 | Man page |
| config_ex_2 | Man page |
| constant_fun | Man page Source code |
| density_fun | Man page Source code |
| empty_delay_array | Source code |
| empty_population_matrix | Source code |
| empty_transition_matrix | Source code |
| ensure_int | Source code |
| expo_fun | Man page Source code |
| feed_fun | Man page Source code |
| find_n_feed | Man page Source code |
| format.predictor_spec | Man page Source code |
| format.transition | Source code |
| gen_transition_matrix | Source code |
| get_pred | Source code |
| get_pred_from_table | Man page Source code |
| get_preds_where_first_day_only_is_false | Source code |
| get_tick_den | Source code |
| get_transition_duration | Source code |
| get_transition_inputs_unevaluated | Source code |
| get_transition_survival | Source code |
| get_transition_value | Source code |
| growth_rate | Man page Source code |
| host_example_config | Man page |
| infect_example_config | Man page |
| infect_fun | Man page Source code |
| life_cycle | Man page Source code |
| life_stages | Source code |
| max_day_in_predictors_table | Source code |
| new_config | Source code |
| new_life_cycle | Source code |
| new_parameters | Source code |
| new_predictor_spec | Source code |
| new_predictors | Source code |
| new_transition | Source code |
| new_transition_function | Man page Source code |
| number_each_element | Source code |
| ogden2005 | Man page |
| ogden_feed_fun | Man page Source code |
| parameters | Man page Source code |
| population_matrix_to_output_df | Source code |
| pred_is_life_stage | Source code |
| predictor_data_varies_over_time | Source code |
| predictor_spec | Man page Source code |
| predictors | Man page Source code |
| print.life_cycle | Source code |
| print.predictor_spec | Man page Source code |
| print.transition | Man page Source code |
| query_transitions | Source code |
| query_transitions_by_mortality | Source code |
| run | Man page Source code |
| set_initial_population | Source code |
| snow_cover_fun | Man page Source code |
| sort_vector_by_names | Source code |
| temp_example_config | Man page |
| to_short_string | Source code |
| transition | Man page Source code |
| transition_function_is_custom | Source code |
| transition_is_mortality | Source code |
| transition_uses_tick_den_predictor_with_first_day_only_false | Source code |
| update_delay_arr | Source code |
| valid_predictors_from_table | Source code |
| validate_config | Source code |
| validate_life_cycle | Source code |
| validate_predictors | Source code |
| validate_transition | Source code |
| validate_transition_value | Source code |
| winter_tick | Man page |
